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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2810.1_66473
Locus scaffold2810.1 : 44070 ... 54629 : -
To GenomeBrowser scaffold2810.1:44070..54629
Genes list of scaffold scaffold2810.1
Synonym pfu_aug2.0_10.1_00019

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2810.1_66473.t1 1 1 ABC_tran 200 250 2.0e-12 47.5 4.8e-15 4.0e-12 46.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2810.1_66473.t1 gi|157117982|ref|XP_001658950.1| AAEL008134-PA [Aedes aegypti] 0.0

Transcript
Transcript IDpfu_aug1.0_2810.1_66473.t1
Definition-
>pfu_aug1.0_2810.1_66473.t1
ctctttcctgtacaacaaactctataagaatatcgtcgtattaaattacaggatccaccggtttcctgaacaacgcccgt
gcgtttttgtggatcagagtccaacaatatacaaccaggaaaatacagctcaaattcctgactcatatccacgggtgaag
tattacggggcctcggaatgggaggtgaatcgatatgatcaggccatcgtcagattccagactgcagaatggaaatccaa
tgcctctttaaacttactcagcgctctgcaaaacttcttcatttccggcggtctattggccggatctttactctgtgcat
acgcagtgacagccgacatacccggcgtcaacctgacggtcggtgactacatcctctttggaacatatttggtgcagctt
tacggaccattaaactggctagggtcatactataggatgatacagcaggcttttattgacatggaaaacatgtttgaact
tttagatgaaaaagcagagattgaggacaagcccggtgccttggatctcagattaccatctgggggagagatatgcttta
aggacgtgtatttctcctatgaacctcaacgtgaagttttacatggaatctcgtttaccgttccagcaggaaaaacttac
gcattggtcggtccttccggaagcggaaaaagtaccataatacgactcttgttccgcttttacgacgtttccttaggatg
cattactatagatggacaaaacatagcaaatgtaattactctcattgtttttattctatttgtatttattgtatttgaag
acgtttaa

Protein
Protein IDpfu_aug1.0_2810.1_66473.t1
Definition-
>pfu_aug1.0_2810.1_66473.t1
SFLYNKLYKNIVVLNYRIHRFPEQRPCVFVDQSPTIYNQENTAQIPDSYPRVKYYGASEWEVNRYDQAIVRFQTAEWKSN
ASLNLLSALQNFFISGGLLAGSLLCAYAVTADIPGVNLTVGDYILFGTYLVQLYGPLNWLGSYYRMIQQAFIDMENMFEL
LDEKAEIEDKPGALDLRLPSGGEICFKDVYFSYEPQREVLHGISFTVPAGKTYALVGPSGSGKSTIIRLLFRFYDVSLGC
ITIDGQNIANVITLIVFILFVFIVFEDV

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