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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_28104.1_69862
Locus scaffold28104.1 : 443 ... 6895 : -
To GenomeBrowser scaffold28104.1:443..6895
Genes list of scaffold scaffold28104.1
Synonym pfu_aug2.0_47.1_23329

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_28104.1_69862.t1 1 1 BEN 293 372 9.3e-06 25.6 2.8e-09 2.1e-05 24.5

Transcript
Transcript IDpfu_aug1.0_28104.1_69862.t1
Definition-
>pfu_aug1.0_28104.1_69862.t1
atgtctttgcgtcagcttaccagattagccagccattaccttgttcgttatgagtgcgaccagaagcttcaagttcgtac
caagggccactttcggtgtcaagatgagactgcatcaggaaagcctgcggcacaagtatacagagctctcactccaccgg
gctactatgacgagtacaacttccccgaatcagactcagagactacgtcaagtacccctgcatcgttatcctcctatagt
gtaccgttatcctccgggagtgtatcgctttcctcctctagtgtatcattatccttcgggagtgtatcgttatcctcctc
tagtgtaacgttatcctccgttacatgtagtgtatcgacgtcagttcagtcaacattgtcttcagggaattcgactgtga
attcgtcaacatctagttgtgttatgtccaacgctattacgtcagtaagttcagctacgagtaccaacataagtgcaatc
gtgacatcgacacccgtacgaccaagagctcagttgtcgtccgacacgacatttacgttccaagctatacgacctgagca
acaacatacgagcctccagtccataaatagtgcactaggaatcataattagatcgattgacacaaacaccggcaagctgg
ataagaaacttgtgatcggctgtctggacactttaagtaagagacagtttgagcttgaaaaatctgttcgatccttacag
gcctcccaagatgtgctcacggccggtgttagtcaatccgttcgtcccacgcctcagaactctatagatgacggagatct
agacagtgtgcggagtgagtttcgaatctctatcgaggagctccgtgacatttataagtgcacaaacggggcggggaata
tggctagtcatctggtgaagagactatttccagaattgtttgggcctgcacaattacagttccagtataattggtacggc
aacgggaaactcaagaaggaaccattggattcaactggcaagaccgtcgtcgagacttacgtgtctcacttctatccgga
agtgcgttccgctgattcttggaaggagagggtggtgcccaagattaatgaacttttaaggcgtagcgataagaaggcca
tcgccatgccagagcgctctcctgcttgtcatgattccttctccttcctaggatacttaaacaacgtctaa

Protein
Protein IDpfu_aug1.0_28104.1_69862.t1
Definition-
>pfu_aug1.0_28104.1_69862.t1
MSLRQLTRLASHYLVRYECDQKLQVRTKGHFRCQDETASGKPAAQVYRALTPPGYYDEYNFPESDSETTSSTPASLSSYS
VPLSSGSVSLSSSSVSLSFGSVSLSSSSVTLSSVTCSVSTSVQSTLSSGNSTVNSSTSSCVMSNAITSVSSATSTNISAI
VTSTPVRPRAQLSSDTTFTFQAIRPEQQHTSLQSINSALGIIIRSIDTNTGKLDKKLVIGCLDTLSKRQFELEKSVRSLQ
ASQDVLTAGVSQSVRPTPQNSIDDGDLDSVRSEFRISIEELRDIYKCTNGAGNMASHLVKRLFPELFGPAQLQFQYNWYG
NGKLKKEPLDSTGKTVVETYVSHFYPEVRSADSWKERVVPKINELLRRSDKKAIAMPERSPACHDSFSFLGYLNNV

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