Gene
| Gene Model ID | pfu_aug1.0_28106.1_62511 |
|---|---|
| Locus | scaffold28106.1 : 2907 ... 6975 : + |
| To GenomeBrowser | scaffold28106.1:2907..6975 |
| Genes list of scaffold | scaffold28106.1 |
| Synonym | NA |
Manual annotation
| Study field | structural proteins |
|---|---|
| Gene name | twitchin |
| Description | Twitchin partial sequence. BLASTP top hit to AB062881 (Mytius galloprovincialis). |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_28106.1_62511.t1 | 1 | 1 | I-set | 9 | 102 | 6.1e-18 | 64.4 | 3.7e-21 | 7.7e-18 | 64.1 |
| pfu_aug1.0_28106.1_62511.t1 | 1 | 1 | Ig_2 | 21 | 102 | 8.4e-09 | 35.4 | 5.4e-12 | 1.2e-08 | 35.0 |
Transcript
| Transcript ID | pfu_aug1.0_28106.1_62511.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28106.1_62511.t1 atgggggtaggagacgatacggctccgaggtttacccagaagcccgtcctaaaacaggaggacaatggcgccaaattggt gttccagtgtacgctggaagcctcgcctaaacctgatatacagtggtaccaaggtacaacgcccatttctcagtcggaca ggattaaaatgcgggtagaacctgccggcggcaacaagtacaatgtgatgatggacattttaggtgttacacaagctgac ggtggaacatacaaagtagtggccaaaaataaactaggagaggtctcggcctctatcaatctcaacttcagcgcgaaatt taatgcgtttttaaaagaggataccaagaagctttcaagcccgtgtcggttagcctatcatctcaactgtaacaacatgt ga |
|
Protein
| Protein ID | pfu_aug1.0_28106.1_62511.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28106.1_62511.t1 MGVGDDTAPRFTQKPVLKQEDNGAKLVFQCTLEASPKPDIQWYQGTTPISQSDRIKMRVEPAGGNKYNVMMDILGVTQAD GGTYKVVAKNKLGEVSASINLNFSAKFNAFLKEDTKKLSSPCRLAYHLNCNNM |
|