Gene
| Gene Model ID | pfu_aug1.0_2813.1_59037 |
|---|---|
| Locus | scaffold2813.1 : 28606 ... 33228 : + |
| To GenomeBrowser | scaffold2813.1:28606..33228 |
| Genes list of scaffold | scaffold2813.1 |
| Synonym | pfu_aug2.0_2015.1_18644 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2813.1_59037.t1 | 1 | 1 | DIE2_ALG10 | 26 | 194 | 0.0 | 175.2 | 0.0 | 0.0 | 174.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2813.1_59037.t1 | gi|260784743|ref|XP_002587424.1| | hypothetical protein BRAFLDRAFT_238544 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2813.1_59037.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2813.1_59037.t1 atgggtgtccactgtggcctagtttctgcacttctcacagctgtcagtgccttgtcattgacctatatttcaaatgtcca accagcgccatacatggatgaagtatttcatgttccccaggtccagaaatattgccaaggcaatttttctgcttgggacc ctatgatcaccacattacctggtctgtacttggttactgtaggagtcctgggccctgtacagtatgttaccaatctctcc acaggagcattgtgctctaccttcaatctacgtgctgttaatgtgctattctgtacagggaacctctaccttatatactg tattcaccagtttctacacaataatgacaaggatgaaaagacgccaaagttgacgacaacattaacctctctgaccttgg gcatattccctgtgctgtatttcttcactttcctatactacacggatccaggctcaacattctttgtgctgatgatgtac ctttttcacctacataaatataagtttatatcggcaatagctggaattttagcaattttctttcggcagacaaacataat atgggttgtatttgtagcaggcctcagtgccagaacttaccttctgaactggatacatcatcacaggnaagttctatatt tggtccaagatatttga |
|
Protein
| Protein ID | pfu_aug1.0_2813.1_59037.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2813.1_59037.t1 MGVHCGLVSALLTAVSALSLTYISNVQPAPYMDEVFHVPQVQKYCQGNFSAWDPMITTLPGLYLVTVGVLGPVQYVTNLS TGALCSTFNLRAVNVLFCTGNLYLIYCIHQFLHNNDKDEKTPKLTTTLTSLTLGIFPVLYFFTFLYYTDPGSTFFVLMMY LFHLHKYKFISAIAGILAIFFRQTNIIWVVFVAGLSARTYLLNWIHHHRXVLYLVQDI |
|