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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_28177.1_40708
Locus scaffold28177.1 : 3061 ... 7495 : -
To GenomeBrowser scaffold28177.1:3061..7495
Genes list of scaffold scaffold28177.1
Synonym pfu_aug2.0_612.1_07726

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_28177.1_40708.t1 2 1 zf-CCHC 76 89 7.5e-07 28.7 0.00012 0.43 10.5
pfu_aug1.0_28177.1_40708.t1 2 2 zf-CCHC 92 107 7.5e-07 28.7 1.8e-07 0.00066 19.4

Transcript
Transcript IDpfu_aug1.0_28177.1_40708.t1
Definition-
>pfu_aug1.0_28177.1_40708.t1
cagacgacggacagataaaatggtccattaatcttcatggatgtcatgtagttaatctttatcgagagaggttgaggtac
cagggtcgccttactaactgtgagacgggtgacaggattctgtttgtatcagagcttgatggaaatctaccaagaacaat
gcaatttggtaaatacaaagctattgtcatccattgggggcaacctgatgatagaaaagaacacacgaagtgtatgcaga
agggccataatatcagagactgtaccaataaggtggtctgtagatcctgccatgcctctggccacataagctcagaatgt
cccatacccctacacgaggacctctctgaagaagaaccttctgatgaggaagctgaatatgaaggtcaagatgaaggaaa
ggtagaggctacccatgaaccctctgaacctgttaacaatgaacagagcaaagatgaagaaccctag

Protein
Protein IDpfu_aug1.0_28177.1_40708.t1
Definition-
>pfu_aug1.0_28177.1_40708.t1
DDGQIKWSINLHGCHVVNLYRERLRYQGRLTNCETGDRILFVSELDGNLPRTMQFGKYKAIVIHWGQPDDRKEHTKCMQK
GHNIRDCTNKVVCRSCHASGHISSECPIPLHEDLSEEEPSDEEAEYEGQDEGKVEATHEPSEPVNNEQSKDEEP

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