Gene
| Gene Model ID | pfu_aug1.0_28204.1_11891 |
|---|---|
| Locus | scaffold28204.1 : 11 ... 4090 : + |
| To GenomeBrowser | scaffold28204.1:11..4090 |
| Genes list of scaffold | scaffold28204.1 |
| Synonym | pfu_aug2.0_1252.1_08283 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_28204.1_11891.t2 | 2 | 1 | Thr_synth_N | 114 | 199 | 4.4e-14 | 52.2 | 1.6e-17 | 1.2e-13 | 50.8 |
| pfu_aug1.0_28204.1_11891.t2 | 2 | 2 | Thr_synth_N | 230 | 249 | 4.4e-14 | 52.2 | 0.96 | 7100.0 | -2.9 |
Transcript
| Transcript ID | pfu_aug1.0_28204.1_11891.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28204.1_11891.t1 atgagttacccgtctgtcgttcgatactttgcaaatactggcgctttcaatgtcaaaagaggcaccagaaataactctgt gcctcatggctgtgatgcatgaacagtcgtgtttttggatgttccaaataatgaaatacttgatcgtttggagaaaatga aagtaaatagaatagttggacaaggtgatggaatgaccatgtccgatattttgaaataccgtcagcaattttatgaaaac agttacgatctccgaatcttgtgtgaagcaggagagactcaggaatctattgccagtaaagtagtatccgccgttaagtc tatggataatgacagaggctatgtgagttctagaggcggagaaacaattggtggcagcggtgggagagtttcacttagtg acgctattcttactggacttgcaccggatggtggcctgtacgtgccatcgtcagagcttccaaaattctctataggtgaa atggatagacttgtaaatctagactacagaagcagagccctaagaatgttagagcgagtgataaatccgtatgatgtcca tccgtcagtcttggcaaactttatctctaaggcatacaatgaagacaatttcttatgtaataagattttcccaattcatc atttgcaagcaaaccagtaccttatagaacttttccatggacctactgcatcttttaaagacgcagctttacagttgatg cctcaactatttgttgaagctttgaagcagaaaggattatatagaaagaaaagtgctgccaattccatcagctggggtcg gcttctaccacaagttgtctaccattcctctgcttacctggaccttgtacagcgaggtgacatacagagtggagaggagg tggacttgtgtatacctactggcaattttggaaatattttagctgcttactatgctaagagaatggggatacctttcaga cggctgatctgtgcatctaacagtaacaatgcggtgacacaattcataaacacgggtacctacgacatacgttctgtaca gcttcagcgcacggcatcgccagctatagacatcctggtgtcatctaatctagaacggtacctctatcacatctcgggat ccactgatgacgtcagacgatggttccagcagttagagcaggacaaacatttcacaatcgatgaaaatgtaagtgaagtc aaatggacattttcagtacggtag |
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| Transcript ID | pfu_aug1.0_28204.1_11891.t2 |
| Definition | - |
>pfu_aug1.0_28204.1_11891.t2 atgagttacccgtctgtcgttcgatactttgcaaatactggcgctttcaatgtcaaaagaggcaccagaaataactctgt gcctcatggctgtgatgcatgaacagtcgtgtttttggatgttccaaataatgaaatacttgatcgtttggagaaaatga aagtaaatagaatagttggacaaggtgatggaatgaccatgtccgatattttgaaataccgtcagcaattttatgaaaac agttacgatctccgaatcttgtgtgaagcaggagagactcaggaatctattgccagtaaagtagtatccgccgttaagtc tatggataatgacagaggctatgtgagttctagaggcggagaaacaattggtggcagcggtgggagagtttcacttagtg acgctattcttactggacttgcaccggatggtggcctgtacgtgccatcgtcagagcttccaaaattctctataggtgaa atggatagacttgtaaatctagactacagaagcagagccctaagaatgttagagcgagtgataaatccgtatgatgtcca tccgtcagtcttggcaaactttatctctaaggcatacaatgaagacaatttcttatgtaataagattttcccaattcatc atttgcaagcaaaccagtaccttatagaacttttccatggacctactgcatcttttaaagacgcagctttacagttgatg cctcaactatttgttgaagctttgaagcagaaaggattatatagaaagaaaagtgctgccaattccatcagctggggtcg gcttctaccacaagttgtctaccattcctctgcttacctggaccttgtacagcgaggtgacatacagagtggagaggagg tggacttgtgtatacctactggcaattttggaaatattttagctgcttactatgctaagagaatggggatacctttcaga cggctgatctgtgcatctaacagtaacaatgcggtgacacaattcataaacacgggtacctacgacatacgttctgtaca gcttcagcgcacggcatcgccagctatagacatcctggtgtcatctaatctagaacggtacctctatcacatctcgggat ccactgatgacgtcagacgatggttccagcagttagagcaggacaaacatttcacaatcgatgaaaatgtaagtgaagtc aaatggacattttcagtacggtag |
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Protein
| Protein ID | pfu_aug1.0_28204.1_11891.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28204.1_11891.t1 MSYPSVVRYFANTGAFNVKRGTRNNSVPHGCDAXTVVFLDVPNNEILDRLEKMKVNRIVGQGDGMTMSDILKYRQQFYEN SYDLRILCEAGETQESIASKVVSAVKSMDNDRGYVSSRGGETIGGSGGRVSLSDAILTGLAPDGGLYVPSSELPKFSIGE MDRLVNLDYRSRALRMLERVINPYDVHPSVLANFISKAYNEDNFLCNKIFPIHHLQANQYLIELFHGPTASFKDAALQLM PQLFVEALKQKGLYRKKSAANSISWGRLLPQVVYHSSAYLDLVQRGDIQSGEEVDLCIPTGNFGNILAAYYAKRMGIPFR RLICASNSNNAVTQFINTGTYDIRSVQLQRTASPAIDILVSSNLERYLYHISGSTDDVRRWFQQLEQDKHFTIDENVSEV KWTFSVR |
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| Protein ID | pfu_aug1.0_28204.1_11891.t2 |
| Definition | - |
>pfu_aug1.0_28204.1_11891.t2 MSYPSVVRYFANTGAFNVKRGTRNNSVPHGCDAXTVVFLDVPNNEILDRLEKMKVNRIVGQGDGMTMSDILKYRQQFYEN SYDLRILCEAGETQESIASKVVSAVKSMDNDRGYVSSRGGETIGGSGGRVSLSDAILTGLAPDGGLYVPSSELPKFSIGE MDRLVNLDYRSRALRMLERVINPYDVHPSVLANFISKAYNEDNFLCNKIFPIHHLQANQYLIELFHGPTASFKDAALQLM PQLFVEALKQKGLYRKKSAANSISWGRLLPQVVYHSSAYLDLVQRGDIQSGEEVDLCIPTGNFGNILAAYYAKRMGIPFR RLICASNSNNAVTQFINTGTYDIRSVQLQRTASPAIDILVSSNLERYLYHISGSTDDVRRWFQQLEQDKHFTIDENVSEV KWTFSVR |
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