Gene
| Gene Model ID | pfu_aug1.0_2828.1_08431 |
|---|---|
| Locus | scaffold2828.1 : 1 ... 17707 : + |
| To GenomeBrowser | scaffold2828.1:1..17707 |
| Genes list of scaffold | scaffold2828.1 |
| Synonym | pfu_aug2.0_4951.1_06063 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2828.1_08431.t1 | 2 | 1 | PALP | 10 | 68 | 6.0e-28 | 97.9 | 1.8e-20 | 2.7e-16 | 59.6 |
| pfu_aug1.0_2828.1_08431.t1 | 2 | 2 | PALP | 117 | 202 | 6.0e-28 | 97.9 | 1.9e-13 | 2.9e-09 | 36.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2828.1_08431.t1 | gi|350536823|ref|NP_001233149.1| | amino acid racemase [Aplysia californica] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2828.1_08431.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2828.1_08431.t1 attattcgcctcaaagagaacaacccagaaatcaaaggagtggtcacacacagtagtgggaaccatgggcaagctttagc atgggctgcaggaattatgcacgtgccatgtgtggtagtggtgccgaacgatacaccaatcgtaaaaattaatgccatca aaggatatggagccgatgtggagctttgtcagccaaatcccacctcaagtagaaatttacaaataatgtcgaagggttcc aactctatacctaaaccaatttccctgcaccagacacgtgttccgaatattaaattctcatcagcgatgctttcttgcca agaggaaagactctggcctaatccacctcagtacctagatacgatagcggatggaatacgaatacaacagctaggacata ttacatggccaattatactccgtaatgtggaaaaagaagtctttaccatctcgaatggagaaatgatagagggaatgaag ttctgttttcagagaatgaagttagtgattgaggctgccgctggggcatctgttgctgccgctatgtccgacaaaatggc aaagatggacccaagcatgaagaacataggcgtgatactttgtggtggaaatgtagatatcgataagctaccttggtatt aa |
|
Protein
| Protein ID | pfu_aug1.0_2828.1_08431.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2828.1_08431.t1 IIRLKENNPEIKGVVTHSSGNHGQALAWAAGIMHVPCVVVVPNDTPIVKINAIKGYGADVELCQPNPTSSRNLQIMSKGS NSIPKPISLHQTRVPNIKFSSAMLSCQEERLWPNPPQYLDTIADGIRIQQLGHITWPIILRNVEKEVFTISNGEMIEGMK FCFQRMKLVIEAAAGASVAAAMSDKMAKMDPSMKNIGVILCGGNVDIDKLPWY |
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