Gene
| Gene Model ID | pfu_aug1.0_2837.1_08436 |
|---|---|
| Locus | scaffold2837.1 : 1 ... 4295 : - |
| To GenomeBrowser | scaffold2837.1:1..4295 |
| Genes list of scaffold | scaffold2837.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2837.1_08436.t1 | 1 | 1 | RVT_1 | 781 | 866 | 7.0e-14 | 51.7 | 5.3e-17 | 2.0e-13 | 50.2 |
Transcript
| Transcript ID | pfu_aug1.0_2837.1_08436.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2837.1_08436.t1 atgactgacttttcggaagatgaactccaggccatttctgcagcactcaaagagatgaaagtcaaacccaaagctgacag tgcatcagatcttaaacagtgcatggtggattatattactcagatgaagtcagatggaaccacaccagtacaagttaaac aggaagcagacactggtaatagcaaagcagatggtggatccaaagtcgtcaccactcacatcccaacgatttcttgttac tctggagatggtagtaaacaagatacctcatatgacctctggaggtatgaagttgactgtctcatcaaggaaaagtacag tgagggagtcatcgcacaatccatacgccgttccttacgcggagatgcggggaaggtagcaatgcgccttggtccagagg caaaggtacaagaaatattggacaagatgcacagcatatttgctactgtagagagaggtgaaaccatcttagaggaattt tatagcgctacccagaagaaagacgatactagtatggcatggtcatgtagacttgaagaaatatttagaaaagccattga gaaaggatcgatgaacagaaatgatgccaatgagaaactgaaatcaagattttggaatgggcttcaccaatggttaaaag acatcagtggttacaagtatgataccatatcagactttgatgatttgaggaaggaggtactactgatggagaaagaacat agtagcaagaagaccaacactaacatggcgatatcagctactggagctacagtacagagtgatgagatgaaggagctgaa aggattgattcagcagctgataacaaaggtgacaaagctagagagaggaaaccagagagacattgaacctaacagaggta gacaacagtatgagactcactttgatggtagacgttataataccagtacacaacagcaacagagaggagatagacagaga ggtcataaaaatttcaaaggtggatatcaacagaatatcagtggtggatatcagcagaatttcagaggtggatatctaca gaatttcagtgatggatatcaacagccatatcacccatactatgacgacaactataaaaagaagacctgcgtcgaagggc acacgttaggtctttccagaagcagacgccctacctctcattacaaacaagaaacatatttagtcggtaatgcgacagaa gtccagatatctattgaggacaaggaaactattgcactttttgacactggttcgactgtatctactgttagcgaatcttt tcatcagcagaatcttcagcgttcaccgctatatcctatcacagacatcctacacattaaatgcgctgatggtggtacct taccttactctggatacaaagaagcttccatttcttctcatggactcccacaatctttggacaactcttctaaattccta ttccttattgtaccagatagcaactacaaccagaaagtacctgttcttctaggaaccaatgttctacaccatttactatc agatgttcatgcttgttgtggagacaagtacttacagacagccaatctccatacaccatggtacctagcattcaggagta tagtactacaagaaaaggaactgaagaaacaacaaaacagattaggaattgtaaagtctgctgagagaaacccagtcact atcccacctaacaccagtatcacagtatccggttacgtagataaatccatgtcataccagcctacaccagcactactcca tccttctactcagtcagtgataacaactaatctggacatagaaccaaccatcatagactacaattattctgttcataatt tgatacacgtccccattgacaacgttactacccgtactgtccagataccacctaaatctatcctctgtgagatacaacct gtcaccatagaagacattgatatttgtaaaggagcccagccaactgacaatttattggacttagtgaaaatggaaaaaga aacattatcacaggagcaaatagaccttggagaaaaacttatccagaaatatttcgacatattctccaaatccgacacag acattggacattcacacatggtcagacaccgcatggagctacatgatgacacccaatttaaacaacgacctcggagaata ccaccttccatgtttgatgaagtaaaacagcttaaccaaagaacaaagaaagactcatatgcgctacctcgggttgatga catcttagacgccctgagtggaaatgcatactttacagtcctcgacatgaaagtagacgaaacacataaagaacggacag ccttcaccgttggcccacttggattttttgagtacaacagaatgccttttgggttagcgaacgccccagccgcgtaccaa aggctcatggaacaatgtttcgagggactccacctgaatatatgctatatctttttggatgaattgatcatttactccaa aacttttgaggaacacctggaaagagtagaaaaagtttttaacagactgaaagaagtaaatctaaagctctcacctaaga aatgcgaatttttcaagagtaaagtcaagtatgttggcaacatcgtctcagagagtggaattgaaccagatcctggaaaa attgacaaggcaaccaattggcctacaccaaccaatcccgatgaagtccgcaagtttttaggtttcgtaggctattaccg tcgtttcatcaagggattttcagacattgcaagacctttttatgacctcttaccagaaggacagaagaaagaaaggaaag gaacgaagccaaaacctccacctgccaaatggaaatgggactcagagcaagaaacagcttttaacactctgaaggaaaag cttacaacataccctatccttgcctat |
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Protein
| Protein ID | pfu_aug1.0_2837.1_08436.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2837.1_08436.t1 MTDFSEDELQAISAALKEMKVKPKADSASDLKQCMVDYITQMKSDGTTPVQVKQEADTGNSKADGGSKVVTTHIPTISCY SGDGSKQDTSYDLWRYEVDCLIKEKYSEGVIAQSIRRSLRGDAGKVAMRLGPEAKVQEILDKMHSIFATVERGETILEEF YSATQKKDDTSMAWSCRLEEIFRKAIEKGSMNRNDANEKLKSRFWNGLHQWLKDISGYKYDTISDFDDLRKEVLLMEKEH SSKKTNTNMAISATGATVQSDEMKELKGLIQQLITKVTKLERGNQRDIEPNRGRQQYETHFDGRRYNTSTQQQQRGDRQR GHKNFKGGYQQNISGGYQQNFRGGYLQNFSDGYQQPYHPYYDDNYKKKTCVEGHTLGLSRSRRPTSHYKQETYLVGNATE VQISIEDKETIALFDTGSTVSTVSESFHQQNLQRSPLYPITDILHIKCADGGTLPYSGYKEASISSHGLPQSLDNSSKFL FLIVPDSNYNQKVPVLLGTNVLHHLLSDVHACCGDKYLQTANLHTPWYLAFRSIVLQEKELKKQQNRLGIVKSAERNPVT IPPNTSITVSGYVDKSMSYQPTPALLHPSTQSVITTNLDIEPTIIDYNYSVHNLIHVPIDNVTTRTVQIPPKSILCEIQP VTIEDIDICKGAQPTDNLLDLVKMEKETLSQEQIDLGEKLIQKYFDIFSKSDTDIGHSHMVRHRMELHDDTQFKQRPRRI PPSMFDEVKQLNQRTKKDSYALPRVDDILDALSGNAYFTVLDMKVDETHKERTAFTVGPLGFFEYNRMPFGLANAPAAYQ RLMEQCFEGLHLNICYIFLDELIIYSKTFEEHLERVEKVFNRLKEVNLKLSPKKCEFFKSKVKYVGNIVSESGIEPDPGK IDKATNWPTPTNPDEVRKFLGFVGYYRRFIKGFSDIARPFYDLLPEGQKKERKGTKPKPPPAKWKWDSEQETAFNTLKEK LTTYPILAY |
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