Gene
| Gene Model ID | pfu_aug1.0_2837.1_08437 |
|---|---|
| Locus | scaffold2837.1 : 6176 ... 13907 : + |
| To GenomeBrowser | scaffold2837.1:6176..13907 |
| Genes list of scaffold | scaffold2837.1 |
| Synonym | pfu_aug2.0_2030.1_01955 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2837.1_08437.t1 | 1 | 1 | LRAT | 15 | 169 | 2.4e-25 | 88.9 | 2.4e-28 | 1.8e-24 | 86.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2837.1_08437.t1 | gi|260811526|ref|XP_002600473.1| | hypothetical protein BRAFLDRAFT_171338 [Branchiostoma floridae] | 7.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_2837.1_08437.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2837.1_08437.t1 atgaagtcaagcgttgatcttttaaataaaatagttatggacgatgctaagcctgcagaccagatcgaatttaagagagg catctattcacattgggcgttatacgtcggtgatggagaggttatacatctggccggagacgatgcccttcaactaagtt ccaaagcttcatcgacattatgttgcggtgtaagcagtacaaaaatcgcaaaagcaactgtgcgtagggatcgtttcatg gatgttgcagggaaatccaaggctgtcattaacaattcaaaggacaaacgattcagtctgcgttctgtctacggattcat cgaggagtacgacatacacgttgtaattactttgtatgtacggacaacttacattcgacgcaagaaagtaagagacatcc caaaatcaacagcggatattctaagatatgcaaaagaacagattggaaaaaagggatacaacttattctttagcaactgt gaacactttgcatcgtattgcagataccggatagcaagatctgatcagatacatgtaagatctgttacgattgtcatccc gttctctcaagcttcaccacgttcccgtacgattaccacgatgagctattacgctttgtcacgctctatcactttaccct acgcttatcaagttacgatctgttacgatgcaggactacgatatgatagatattgcggcgatttaacacgatttgatatg acatag |
|
Protein
| Protein ID | pfu_aug1.0_2837.1_08437.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2837.1_08437.t1 MKSSVDLLNKIVMDDAKPADQIEFKRGIYSHWALYVGDGEVIHLAGDDALQLSSKASSTLCCGVSSTKIAKATVRRDRFM DVAGKSKAVINNSKDKRFSLRSVYGFIEEYDIHVVITLYVRTTYIRRKKVRDIPKSTADILRYAKEQIGKKGYNLFFSNC EHFASYCRYRIARSDQIHVRSVTIVIPFSQASPRSRTITTMSYYALSRSITLPYAYQVTICYDAGLRYDRYCGDLTRFDM T |
|