Gene
| Gene Model ID | pfu_aug1.0_2839.1_15959 |
|---|---|
| Locus | scaffold2839.1 : 21025 ... 29885 : - |
| To GenomeBrowser | scaffold2839.1:21025..29885 |
| Genes list of scaffold | scaffold2839.1 |
| Synonym | pfu_aug2.0_182.1_07107 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2839.1_15959.t1 | 1 | 1 | Calponin | 71 | 95 | 5.1e-08 | 32.1 | 5.5e-12 | 8.2e-08 | 31.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2839.1_15959.t1 | gi|29841466|gb|AAP06498.1| | similar to GenBank Accession Number Z29075 myophilin antigen in Echinococcus granulosus [Schistosoma japonicum] | 4.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2839.1_15959.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2839.1_15959.t1 atggagtatggcgtaccggaatcctgcacgtttcagacagactacctctatgagaaaaccaatctagtacaagtgtgtac ttgtataagggcattaggaatagaggcgcagtcacatcctagctacacgggccccatcatatggccaaagaaagccgagg aaaacaaacggaaattctccaacgatcagttaaacgcgggtcaacaggtcatcagtttacaatatgggacgaacagaggt gcaagtcaagctggcatgaacttcggaaaacagagaatgatcatagattga |
|
Protein
| Protein ID | pfu_aug1.0_2839.1_15959.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2839.1_15959.t1 MEYGVPESCTFQTDYLYEKTNLVQVCTCIRALGIEAQSHPSYTGPIIWPKKAEENKRKFSNDQLNAGQQVISLQYGTNRG ASQAGMNFGKQRMIID |
|