Gene
| Gene Model ID | pfu_aug1.0_2839.1_15960 |
|---|---|
| Locus | scaffold2839.1 : 32836 ... 41030 : + |
| To GenomeBrowser | scaffold2839.1:32836..41030 |
| Genes list of scaffold | scaffold2839.1 |
| Synonym | pfu_aug2.0_182.1_07106 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2839.1_15960.t1 | 1 | 1 | CH | 8 | 113 | 4.0e-13 | 49.3 | 1.6e-16 | 7.7e-13 | 48.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2839.1_15960.t1 | gi|29336625|sp|Q24799.1|MYPH_ECHGR | Myophilin [Echinococcus granulosus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2839.1_15960.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2839.1_15960.t1 atgtatagggacaaggagctcgagaatcaagctctagaatggatagccgaaaatctgaaaggcacgggaaatgatacatt cgaccagaaaggggctatagaagacatactgaaggatggaatagtgctttgcaatcttatgaataaactcatgcctggtt gcattaagaaaattgacaaaaaaggaggaggcttcgctctaatgcaaaacatcgaacgattccaagaagcagccaagaaa tacggcgtacctgttaacgaagttttccagaccgtcgacctttgggaaagaaaaaatataccccaggttacgctatgtat tcatgcgctaggacgtgtggcgcaaaccagagatgactacacaggaccaatgctcggcccaaaaatggccgagaagcaga cccgggactttaccgaggatcagctacgagagggtagaaatgtcatcagcttacagtacggaagtaacaagggcgcaagt caagccggaattaacatgggaaaacaaagaatgatcaacgattag |
|
Protein
| Protein ID | pfu_aug1.0_2839.1_15960.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2839.1_15960.t1 MYRDKELENQALEWIAENLKGTGNDTFDQKGAIEDILKDGIVLCNLMNKLMPGCIKKIDKKGGGFALMQNIERFQEAAKK YGVPVNEVFQTVDLWERKNIPQVTLCIHALGRVAQTRDDYTGPMLGPKMAEKQTRDFTEDQLREGRNVISLQYGSNKGAS QAGINMGKQRMIND |
|