Gene
| Gene Model ID | pfu_aug1.0_28408.1_33671 |
|---|---|
| Locus | scaffold28408.1 : 1 ... 7275 : - |
| To GenomeBrowser | scaffold28408.1:1..7275 |
| Genes list of scaffold | scaffold28408.1 |
| Synonym | pfu_aug2.0_4.1_13348 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_28408.1_33671.t1 | 2 | 1 | PALP | 4 | 80 | 5.5e-20 | 71.8 | 2.1e-18 | 1.1e-14 | 54.4 |
| pfu_aug1.0_28408.1_33671.t1 | 2 | 2 | PALP | 86 | 134 | 5.5e-20 | 71.8 | 3.5e-08 | 0.00017 | 20.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_28408.1_33671.t1 | gi|260823748|ref|XP_002606830.1| | hypothetical protein BRAFLDRAFT_286400 [Branchiostoma floridae] | 1.0e-39 |
Transcript
| Transcript ID | pfu_aug1.0_28408.1_33671.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28408.1_33671.t1 atgctgtcaaaggagcagaaggagaaaggtgtgatagcggccagtgctggtaaccacgccctagccctgtcgtaccacgg acatgatctaggtattaacgtcactgtcatcatgcctatcatagctcctataatgaaagtgtcagcatgtaaaagttacg gtgccaacgtcattatccacggagctgatatatcagtgtcaaaagattatgcacagagacttggaaaagaaaagggacta atgtacattaatggagaggagtacatagccctggccatactgcgattagtagaattggagaaagccgtggtggaaggagc tggtgccacaggcctagcagctataatacaaggattggtacccgaactagaaggcaaaaaagtggtagtagctctctgtg gaggtaacatcgacactactgcccttggtagagtcatagagagaggtttagctgcagatcaccggctgatacggtttgtg gtcactgtcagtgatagaccaggcggtatagcagaactgaccaaagtattatctgatctaggtgtcagcttgtcggattg a |
|
Protein
| Protein ID | pfu_aug1.0_28408.1_33671.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28408.1_33671.t1 MLSKEQKEKGVIAASAGNHALALSYHGHDLGINVTVIMPIIAPIMKVSACKSYGANVIIHGADISVSKDYAQRLGKEKGL MYINGEEYIALAILRLVELEKAVVEGAGATGLAAIIQGLVPELEGKKVVVALCGGNIDTTALGRVIERGLAADHRLIRFV VTVSDRPGGIAELTKVLSDLGVSLSD |
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