Gene
| Gene Model ID | pfu_aug1.0_28548.1_04643 |
|---|---|
| Locus | scaffold28548.1 : 1 ... 13270 : - |
| To GenomeBrowser | scaffold28548.1:1..13270 |
| Genes list of scaffold | scaffold28548.1 |
| Synonym | pfu_aug2.0_3381.1_05821 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_28548.1_04643.t1 | 1 | 1 | G8 | 2 | 113 | 1.9e-25 | 89.0 | 2.1e-29 | 3.1e-25 | 88.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_28548.1_04643.t1 | gi|344271237|ref|XP_003407447.1| | PREDICTED: transmembrane protein 2 [Loxodonta africana] | 4.0e-36 |
Transcript
| Transcript ID | pfu_aug1.0_28548.1_04643.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28548.1_04643.t1 acacctggtgccaatcagaatgttacaatcacaaggcccattctactggataccacacctcccgaacttttcagtataac gatagaatcaggcgggcggttagtgtggggtaccgatggagactacagtctacgtctccactacatcctcgtcaagtcag ggggagaaatgcacattggatctgaggactgtaaattctctgccaaggcttccattactttacttggtgagcctggggaa ttggaaatcactggttttggagaaaaattcatcggagtgcaatcaggcggaacattggaactgcatggacaagataagct gtcctggacaaaagttaccaaaactgttccgaaatttgatttgtcactggggcaaaagtttggacacaaggaacttgagg gtacacagcactgggatggagtgtttgcttaccagttcacaccagatggcacctacgtgaaccgactgttccggtccatt tcacacaaccggcagaaatctgtggactggaacatcggcaaactgaagaaattcatggatggtgttgccgatggtaacat attggcctttgctacacagagagaccacaataggaaaggaagtgaccacagcgccctctatgacctgatagatagcgtag ccgggcctaataagttacgacagatcggctctaagtctgcctatgcactcgttactgtgaaaggtcagccatccagtact gtggattcattaagccacgtggatcttaactcaaattccgattccgcatacgctagagtggagagggcaatgacagtgaa cggggaggatctacagttggtcgtggagtcgtactataacgccagacgacgatggatggggtatagcaacttcagggtga tggacacaaagtactcaaatccaatcatcgatttagtagacgaaccaaggggctggaaagcaggtgacaggatttttgta acatccactgactatgactggcagcaagtagaagagcgcaccttaatgtcatgtcctaagtgtaccgctacacagatcaa agtcgacatagaaagaggattttctgtgttctactgtttggaacaggatgaaagtcacagggtattacttatttcaggtc gttaccctttacattaccatatgtgtgataacctgactgatacgacactgtaccctacaccatcgtacatcaggaaaaac tccattcatcatacccagttcagatgtctcaccatccacggaacacacggagctcac |
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Protein
| Protein ID | pfu_aug1.0_28548.1_04643.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28548.1_04643.t1 TPGANQNVTITRPILLDTTPPELFSITIESGGRLVWGTDGDYSLRLHYILVKSGGEMHIGSEDCKFSAKASITLLGEPGE LEITGFGEKFIGVQSGGTLELHGQDKLSWTKVTKTVPKFDLSLGQKFGHKELEGTQHWDGVFAYQFTPDGTYVNRLFRSI SHNRQKSVDWNIGKLKKFMDGVADGNILAFATQRDHNRKGSDHSALYDLIDSVAGPNKLRQIGSKSAYALVTVKGQPSST VDSLSHVDLNSNSDSAYARVERAMTVNGEDLQLVVESYYNARRRWMGYSNFRVMDTKYSNPIIDLVDEPRGWKAGDRIFV TSTDYDWQQVEERTLMSCPKCTATQIKVDIERGFSVFYCLEQDESHRVLLISGRYPLHYHMCDNLTDTTLYPTPSYIRKN SIHHTQFRCLTIHGTHGAH |
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