Gene
| Gene Model ID | pfu_aug1.0_28593.1_19251 |
|---|---|
| Locus | scaffold28593.1 : 1 ... 17662 : - |
| To GenomeBrowser | scaffold28593.1:1..17662 |
| Genes list of scaffold | scaffold28593.1 |
| Synonym | pfu_aug2.0_1053.1_11402 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_28593.1_19251.t1 | 7 | 1 | zf-C2H2 | 274 | 296 | 8.5e-13 | 47.8 | 0.00073 | 1.3 | 9.4 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 1 | zf-C2H2_4 | 275 | 296 | 1.0e-10 | 41.1 | 0.0034 | 6.2 | 7.3 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 1 | zf-H2C2_5 | 275 | 296 | 1.0e-06 | 28.6 | 0.015 | 28.0 | 5.2 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 2 | zf-C2H2 | 303 | 325 | 8.5e-13 | 47.8 | 0.00057 | 1.1 | 9.7 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 2 | zf-C2H2_4 | 303 | 325 | 1.0e-10 | 41.1 | 0.00035 | 0.64 | 10.4 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 2 | zf-H2C2_5 | 303 | 323 | 1.0e-06 | 28.6 | 7.5e-05 | 0.14 | 12.4 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 3 | zf-C2H2_4 | 331 | 350 | 1.0e-10 | 41.1 | 0.025 | 47.0 | 4.6 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 3 | zf-H2C2_5 | 331 | 354 | 1.0e-06 | 28.6 | 6.0e-06 | 0.011 | 15.9 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 3 | zf-C2H2 | 332 | 353 | 8.5e-13 | 47.8 | 0.0051 | 9.5 | 6.7 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 4 | zf-C2H2 | 363 | 385 | 8.5e-13 | 47.8 | 0.00032 | 0.59 | 10.5 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 4 | zf-C2H2_4 | 363 | 385 | 1.0e-10 | 41.1 | 0.0012 | 2.3 | 8.7 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 4 | zf-H2C2_5 | 363 | 385 | 1.0e-06 | 28.6 | 0.0024 | 4.5 | 7.7 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 5 | zf-C2H2 | 399 | 421 | 8.5e-13 | 47.8 | 1.3e-06 | 0.0025 | 18.0 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 5 | zf-C2H2_4 | 399 | 421 | 1.0e-10 | 41.1 | 9.2e-06 | 0.017 | 15.4 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 5 | zf-H2C2_5 | 399 | 421 | 1.0e-06 | 28.6 | 2.3e-05 | 0.044 | 14.0 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 6 | zf-C2H2 | 427 | 449 | 8.5e-13 | 47.8 | 1.9e-06 | 0.0036 | 17.5 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 6 | zf-C2H2_4 | 427 | 449 | 1.0e-10 | 41.1 | 2.3e-05 | 0.043 | 14.1 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 6 | zf-H2C2_5 | 427 | 449 | 1.0e-06 | 28.6 | 0.066 | 120.0 | 3.1 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 7 | zf-C2H2 | 459 | 471 | 8.5e-13 | 47.8 | 0.0035 | 6.4 | 7.3 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 7 | zf-C2H2_4 | 459 | 471 | 1.0e-10 | 41.1 | 0.0051 | 9.4 | 6.8 |
| pfu_aug1.0_28593.1_19251.t1 | 7 | 7 | zf-H2C2_5 | 459 | 465 | 1.0e-06 | 28.6 | 0.87 | 1600.0 | -0.4 |
Transcript
| Transcript ID | pfu_aug1.0_28593.1_19251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28593.1_19251.t1 atgtcgtataaactggtatacaaactcggcgcttctcgcacaagtttgattttcggcaagaagcggcgagaagtggagac atgtacacaatgcctgcaaagggagaatactcctgtttccatcatcctgcccaataatacagtaaccatggcaacagaga ctcctctgacgatgatatcgatacccgatatagatgtcgtcagacagaatgctcaaagtcagaggcaaattggtcagcaa caagaagtttatagtataaataatgaggcattaagtgatcagcaagtaacctacagagtggtgctgccatctactgatag ctcagaaatgtatgcaatactctcacatataccgagggagatgaaggcagagtcaacaagccagaagggggatatagcaa ggcgtaacgaaggagggagtgttcagatgagaggcagtgataatgaaactgtgagtgttcagttggcagtgcaagggaat gaggctcaaagtgttcaagttacagaggacagaaaagataatgtgattggaacataccaagaaattgaaaaagagagtgt tcaagtggcagtacctggcaaagatcatgggagtgttcaggtagctttacaagggaatgaaaatgtagttctcgccattg atgacagtgaaaacacacagcatattgtcaggattgattctacttcaggtgaaaatcagaactatccagttgttaaaagt aaaggattcatatttgttgtagatcaaggtaaaaaagctacaggatccaaaggcaggaggaaaacatggaaggattacga atctttactccaatataagttcttctgcacgatgtgctccttcaaaaccaaacgacaaagtcactacctcaaacacctca aatatcacgagaaacaaccaaaattatatcactgtaagctctgtgacttcaaaacgatacgtaacggtgaattacgtaaa catgaagtgaaccatagcggaaatgtgatagcgtgctccctttgtaaatacgtcacagatgatcaagtagccatgaatag acataaacgactcaaacatggagacaaacattttgtgcgggaccattacgtttgcttgatttgtaaattcaagtccgtca ctttaaagaaattagaaaaacatatgcagcaacataagtccccggaagacgagcatgtaagcttgacaatgcaatactcg tgtgatatatgtccgtataagacgaagaggaaggaacatttgattcggcacaaaaacgttcactcggatcatagacctta tctatgtgacacatgcggtcagaagttcaagaggaccgatgccctgacgcagcacaaattggtccatgtagacaagcaga accgaaagtacggatttaaatgtaccaaatgtaacaaaggcttcagatcacaggtgaggtcaaaataa |
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Protein
| Protein ID | pfu_aug1.0_28593.1_19251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28593.1_19251.t1 MSYKLVYKLGASRTSLIFGKKRREVETCTQCLQRENTPVSIILPNNTVTMATETPLTMISIPDIDVVRQNAQSQRQIGQQ QEVYSINNEALSDQQVTYRVVLPSTDSSEMYAILSHIPREMKAESTSQKGDIARRNEGGSVQMRGSDNETVSVQLAVQGN EAQSVQVTEDRKDNVIGTYQEIEKESVQVAVPGKDHGSVQVALQGNENVVLAIDDSENTQHIVRIDSTSGENQNYPVVKS KGFIFVVDQGKKATGSKGRRKTWKDYESLLQYKFFCTMCSFKTKRQSHYLKHLKYHEKQPKLYHCKLCDFKTIRNGELRK HEVNHSGNVIACSLCKYVTDDQVAMNRHKRLKHGDKHFVRDHYVCLICKFKSVTLKKLEKHMQQHKSPEDEHVSLTMQYS CDICPYKTKRKEHLIRHKNVHSDHRPYLCDTCGQKFKRTDALTQHKLVHVDKQNRKYGFKCTKCNKGFRSQVRSK |
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