Gene
| Gene Model ID | pfu_aug1.0_2864.1_44513 |
|---|---|
| Locus | scaffold2864.1 : 17436 ... 42426 : - |
| To GenomeBrowser | scaffold2864.1:17436..42426 |
| Genes list of scaffold | scaffold2864.1 |
| Synonym | pfu_aug2.0_205.1_17121 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2864.1_44513.t1 | 3 | 1 | RRM_1 | 82 | 125 | 7.9e-23 | 79.8 | 2.5e-08 | 9.1e-05 | 22.0 |
| pfu_aug1.0_2864.1_44513.t1 | 3 | 1 | RRM_6 | 82 | 126 | 6.0e-19 | 67.7 | 6.8e-07 | 0.0025 | 17.7 |
| pfu_aug1.0_2864.1_44513.t1 | 3 | 1 | RRM_5 | 90 | 118 | 6.6e-11 | 41.9 | 0.00011 | 0.4 | 10.5 |
| pfu_aug1.0_2864.1_44513.t1 | 3 | 2 | RRM_1 | 174 | 239 | 7.9e-23 | 79.8 | 6.4e-12 | 2.4e-08 | 33.5 |
| pfu_aug1.0_2864.1_44513.t1 | 3 | 2 | RRM_6 | 174 | 240 | 6.0e-19 | 67.7 | 1.5e-09 | 5.5e-06 | 26.2 |
| pfu_aug1.0_2864.1_44513.t1 | 3 | 2 | RRM_5 | 204 | 244 | 6.6e-11 | 41.9 | 4.2e-09 | 1.6e-05 | 24.6 |
| pfu_aug1.0_2864.1_44513.t1 | 3 | 3 | RRM_1 | 449 | 516 | 7.9e-23 | 79.8 | 2.3e-08 | 8.4e-05 | 22.1 |
| pfu_aug1.0_2864.1_44513.t1 | 3 | 3 | RRM_6 | 449 | 507 | 6.0e-19 | 67.7 | 6.9e-08 | 0.00026 | 20.9 |
| pfu_aug1.0_2864.1_44513.t1 | 3 | 3 | RRM_5 | 498 | 519 | 6.6e-11 | 41.9 | 0.018 | 65.0 | 3.4 |
| pfu_aug1.0_2864.1_44513.t1 | 1 | 1 | TUDOR | 642 | 728 | 6.1e-11 | 42.2 | 3.7e-14 | 1.4e-10 | 41.0 |
Transcript
| Transcript ID | pfu_aug1.0_2864.1_44513.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2864.1_44513.t1 gttagagtttgatgacggaatgatggcgtataaaatgttcggtataggagacccaaacacgtatatgtcacttagtgcaa aaagggcggaaggacgtaataggggtaaggcctctcccaccaaatcaccgtcctctagtacgacaatgaacggtacttgt tcccggcctgacctcgaggacaagctaataccaaacatgcgaggccacatctctgtgtgttatcccagggacagagaact tgatgatgcttcagtcgatgatgttaaggagaaattttcacaatttggagaggttgctgaagtacacatgattcctaagt ttatatttgtgaggtttacggacaaggaagctgtgatagcatcattagataggtatgaaaaggaactgaggctgcgaatt gcggaggagaaagccccgagcaccagtaacagacaacaaaactccagtactaaagccgacactacggagtcctcagacag catgctggtcaaaaaatctccagaaaaagagccgtatgaagtattccttaacaacgtggcctgtgaatccacagaggatg atttgaatgaattgttgtcgcagtttaattacaaatatgcgagaaggataactaaagacgaaaaaagagtatttgcgttt gttggctttagtacacagtctgatgctgaggaaatgatcagtaagctacatggttatcaatggaaaggcagggcgctgaa ctgtcgtctgagtagagatgataaaccacagacctccacacaggatagtaagcctgaagaggagcagccaaagttttcct ggagaggcgcagtaaataacacaagctctgagaatcactcatctcaatcaaatactgacacccagaatgactgggatgat gaccctgaggatcctgggcttaagttaaagctaagtgtaacgagcagcaaggttaacacagcaagtcccaagcaaacaat gacggacaccaaacctgctgtgtcaccagttaagcttcccagtatgccatcggtgaatgctacacaacaactgtcataca atcagaccagtgtcagcccaaagaaagctagtaatacacaaggcatgttcaatcagttccaacagctaactgtgcagaca aacttccgtgacggcagcagttccagagaagtaaaaagtccaatgtctaatcatagcacaagaagtcctcaaaaagctgt gccatatcagaatggtgtacgatctccatacaaaagtcccgctatgccagctttacagccgttagagagtgaggatccat atggtgaaatgccgccccttgagttagccgttaatgaaacgccaggggaggaggatattgtaggactgtttgtaggaaat ttcccattcggcatgagtgatgaggagttgttagaagtgtttaggccctatgatccaagacatgtcgtagtgttcaacag agatcagagctacagcagctccaaggctatggtgtacgtcaatggaatgccaaatgctcgccaggcaattaaagactgga atcagaactttctctataatagacgactgttggtggacattgacagaaagcatccagactatgaagctaacaaagctgtg tacgagaggatggagagtaaatctcagggctataacccaatgtacagacagcaacaacatcatatggggggctaccaagg aaatcgttataatcaaggttatcaaaattataatcagaattcctatggaggatacacaccacgacgctctcctgcccagt ctggtcccgtttcccctactccaagtaacacctccgtcagctctactgattctatcaaacagaggtctttcacttccata ttacagacatttaagatcattatgaacactctacagcgtcgtccccaggctgtacgaccaatcaaaggagtagaacttct gggacttatcactaacgtgtatgacgaaagaaatttctgggtccatatcgttcaaggggaatccatacagaacctagagc agacaatgatgatgttacaagagagagagacgaggatcgggccgaccaaaggtcttggtagatgtgccgctaggtttgac aatgaatggttcagggcctggattatttctgacccacgtgaggggtttaaggtggatgttttctatgtcgactacggtaa catggcacgtgtcaacaaaggggagacaagcctgactttgcccgatgcctgggagttacctgttaacttgtatccattca gactggcagagcctgttagtcatgttaatatgctcatccccttatacattgtgaaattgagcagttcatag |
|
Protein
| Protein ID | pfu_aug1.0_2864.1_44513.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2864.1_44513.t1 LEFDDGMMAYKMFGIGDPNTYMSLSAKRAEGRNRGKASPTKSPSSSTTMNGTCSRPDLEDKLIPNMRGHISVCYPRDREL DDASVDDVKEKFSQFGEVAEVHMIPKFIFVRFTDKEAVIASLDRYEKELRLRIAEEKAPSTSNRQQNSSTKADTTESSDS MLVKKSPEKEPYEVFLNNVACESTEDDLNELLSQFNYKYARRITKDEKRVFAFVGFSTQSDAEEMISKLHGYQWKGRALN CRLSRDDKPQTSTQDSKPEEEQPKFSWRGAVNNTSSENHSSQSNTDTQNDWDDDPEDPGLKLKLSVTSSKVNTASPKQTM TDTKPAVSPVKLPSMPSVNATQQLSYNQTSVSPKKASNTQGMFNQFQQLTVQTNFRDGSSSREVKSPMSNHSTRSPQKAV PYQNGVRSPYKSPAMPALQPLESEDPYGEMPPLELAVNETPGEEDIVGLFVGNFPFGMSDEELLEVFRPYDPRHVVVFNR DQSYSSSKAMVYVNGMPNARQAIKDWNQNFLYNRRLLVDIDRKHPDYEANKAVYERMESKSQGYNPMYRQQQHHMGGYQG NRYNQGYQNYNQNSYGGYTPRRSPAQSGPVSPTPSNTSVSSTDSIKQRSFTSILQTFKIIMNTLQRRPQAVRPIKGVELL GLITNVYDERNFWVHIVQGESIQNLEQTMMMLQERETRIGPTKGLGRCAARFDNEWFRAWIISDPREGFKVDVFYVDYGN MARVNKGETSLTLPDAWELPVNLYPFRLAEPVSHVNMLIPLYIVKLSSS |
|