Gene
| Gene Model ID | pfu_aug1.0_2871.1_23095 |
|---|---|
| Locus | scaffold2871.1 : 25707 ... 33495 : - |
| To GenomeBrowser | scaffold2871.1:25707..33495 |
| Genes list of scaffold | scaffold2871.1 |
| Synonym | pfu_aug2.0_213.1_10443 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2871.1_23095.t1 | 1 | 1 | DcpS_C | 7 | 117 | 3.7e-31 | 107.7 | 8.0e-35 | 6.0e-31 | 107.0 |
| pfu_aug1.0_2871.1_23095.t1 | 1 | 1 | HIT | 20 | 109 | 5.7e-09 | 36.3 | 2.5e-12 | 1.9e-08 | 34.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2871.1_23095.t1 | gi|346472879|gb|AEO36284.1| | 1.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2871.1_23095.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2871.1_23095.t1 atggatgggaacatggagagatgtattttctgtaaaatagcagccaagaatgatcccaaaacacaaatcttatatgagga caatgaatttgttgtgttcaaagacataaaaccagctgccacacatcattatttggttattaccaaagttcacataaagg accctaagcagctaaatggaggtcatattgacctagtggagaaaatggttgctgttggtaacagaattttggaagataaa catgctgatgtacaaaattccagatttggttttcactggccaccattcacatctgtgcagcatctacatctccatgcaat atctccaaccacagagatgggattcataggaaagggaatattctcacctaactcattctggtttgtaacggctgattggc tcctgactagactgaaaaacatgaaatctaagacagacgctcttaatcttactaaagacaaacagacagacaatactgta tcaaacaatcaaaatgaggatcctaaattctcttcatcggtggatcctatagatgtacagggctctgttgtcactcctcc acaggatcagaaggatttatga |
|
Protein
| Protein ID | pfu_aug1.0_2871.1_23095.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2871.1_23095.t1 MDGNMERCIFCKIAAKNDPKTQILYEDNEFVVFKDIKPAATHHYLVITKVHIKDPKQLNGGHIDLVEKMVAVGNRILEDK HADVQNSRFGFHWPPFTSVQHLHLHAISPTTEMGFIGKGIFSPNSFWFVTADWLLTRLKNMKSKTDALNLTKDKQTDNTV SNNQNEDPKFSSSVDPIDVQGSVVTPPQDQKDL |
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