Gene
| Gene Model ID | pfu_aug1.0_28793.1_55275 |
|---|---|
| Locus | scaffold28793.1 : 1 ... 5278 : + |
| To GenomeBrowser | scaffold28793.1:1..5278 |
| Genes list of scaffold | scaffold28793.1 |
| Synonym | pfu_aug2.0_5.1_16669 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_28793.1_55275.t1 | 2 | 1 | AIG1 | 37 | 244 | 0.0 | 210.0 | 0.0 | 0.0 | 210.0 |
| pfu_aug1.0_28793.1_55275.t1 | 1 | 1 | MMR_HSR1 | 38 | 152 | 8.2e-09 | 35.4 | 1.2e-11 | 2.1e-08 | 34.0 |
| pfu_aug1.0_28793.1_55275.t1 | 1 | 1 | FeoB_N | 38 | 173 | 1.1e-06 | 28.0 | 1.1e-09 | 2.1e-06 | 27.0 |
| pfu_aug1.0_28793.1_55275.t1 | 2 | 2 | AIG1 | 365 | 392 | 0.0 | 210.0 | 0.81 | 1500.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_28793.1_55275.t1 | gi|348544498|ref|XP_003459718.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_28793.1_55275.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28793.1_55275.t1 gagcagaggcttttaccttcgagaacccttcagatggaccattgtacagttcaaatgatgtgcatcgtttctcaccgaac aagtcaacttacggtgttcaggagaatgaacggcgaatccttctgataggtaaaactggtgtcggcaaaagtgcaacagg aaataacatactcggggaaaagacatttcaatcaaaaatgtcaggaaaatcagtcactaagaagagtcaaataggacggg cggacagatttggtaaaaagctcctactcgttgatactccaggaatcttcgatactggaaagacaaacgaggaagttatc acagaaatagtaaaatgtataggtataacaagtccaggcctacatgccattatattggtagtacatattggtcgttttac ggaggaggaaaagaagacggttgatctgtttctgaatcatttaggtcagcaactgattcaatttcttgtagttgttttta cccgaaaagatgatttagatcgtgaaaatactaccattgacgagtatgtagatagccttgagccgtcttcattgcttgca gaaattattcagaaaagcagatgtcgatatgtagcctttgacaacacggcagttgggcaacaaaatgacgaccaagtcaa aagattattctctgtaatagaaaatttgattcgagagaatggaggtacattctacacgaatgacatgtatagagaagcag agatggcaatgagacgtcgaatggatgaagagcgcaggcgcttagaggaagaaaaaagactggcaattgaaaggattgaa gctcctttcagagccaaaattgaaaatgaacgacgagaacgtgagtctttgtcacatgatttagtcttgactaaaatgca aacggcatcccttacccatgacaaatcccggatggaagaggaattagaaatgacgaaacgtcgatctgaaagatatgccg ctgagagggaaaacgagagaagaagaatggaagaggaaagaaggagagatcaagaaatcaacgagagaaggatgagggaa attagagaggaatctcaaagaagagatgacgaaagaagaagagaatatgatcagaggcagcgacagatggaagacgatcg tagaagagataaagaggaaatgaataaacaaagaaaagaaattgaaagggtgaaggcagagtatgataaaagaatgcgtg atcaaaatatcagggaagctgcgagagatgatgttgagaaagaaaaacccggaatccttgcaacaataatcgaggcagtg tctgaagtcccagttattggacctgttgtaaaggttattggaaaattgttcaaactcttttag |
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Protein
| Protein ID | pfu_aug1.0_28793.1_55275.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_28793.1_55275.t1 AEAFTFENPSDGPLYSSNDVHRFSPNKSTYGVQENERRILLIGKTGVGKSATGNNILGEKTFQSKMSGKSVTKKSQIGRA DRFGKKLLLVDTPGIFDTGKTNEEVITEIVKCIGITSPGLHAIILVVHIGRFTEEEKKTVDLFLNHLGQQLIQFLVVVFT RKDDLDRENTTIDEYVDSLEPSSLLAEIIQKSRCRYVAFDNTAVGQQNDDQVKRLFSVIENLIRENGGTFYTNDMYREAE MAMRRRMDEERRRLEEEKRLAIERIEAPFRAKIENERRERESLSHDLVLTKMQTASLTHDKSRMEEELEMTKRRSERYAA ERENERRRMEEERRRDQEINERRMREIREESQRRDDERRREYDQRQRQMEDDRRRDKEEMNKQRKEIERVKAEYDKRMRD QNIREAARDDVEKEKPGILATIIEAVSEVPVIGPVVKVIGKLFKLF |
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