Gene
| Gene Model ID | pfu_aug1.0_2891.1_15978 |
|---|---|
| Locus | scaffold2891.1 : 41498 ... 46935 : - |
| To GenomeBrowser | scaffold2891.1:41498..46935 |
| Genes list of scaffold | scaffold2891.1 |
| Synonym | pfu_aug2.0_165.1_17055 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2891.1_15978.t1 | 1 | 1 | DSBA | 18 | 72 | 1.2e-07 | 31.5 | 8.7e-12 | 1.3e-07 | 31.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2891.1_15978.t1 | gi|260793202|ref|XP_002591601.1| | hypothetical protein BRAFLDRAFT_281070 [Branchiostoma floridae] | 1.0e-20 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2891.1_15978.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2891.1_15978.t1 atggaggctggaaagttagcagggatgaatgatgagttaattaaggagtctatcggcagaatcaaggaccaggatgtgaa ggaccgactgaaggcttacactcaagaggcattaaatcatggggcttttggtgctcccactttcatagcacatgttgatg ggaaacaggaaatggtgtttggttctgaccgattccctattcttgcaaaaatattaggtgaagaatggctgggaccttta aaagaagaggctcgtgctaaattatga |
|
Protein
| Protein ID | pfu_aug1.0_2891.1_15978.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2891.1_15978.t1 MEAGKLAGMNDELIKESIGRIKDQDVKDRLKAYTQEALNHGAFGAPTFIAHVDGKQEMVFGSDRFPILAKILGEEWLGPL KEEARAKL |
|