Gene
| Gene Model ID | pfu_aug1.0_2892.1_44521 |
|---|---|
| Locus | scaffold2892.1 : 21852 ... 35065 : - |
| To GenomeBrowser | scaffold2892.1:21852..35065 |
| Genes list of scaffold | scaffold2892.1 |
| Synonym | pfu_aug2.0_476.1_20815 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2892.1_44521.t1 | 1 | 1 | Neur_chan_LBD | 34 | 247 | 0.0 | 235.9 | 0.0 | 0.0 | 235.5 |
| pfu_aug1.0_2892.1_44521.t1 | 1 | 1 | Neur_chan_memb | 254 | 487 | 0.0 | 264.1 | 0.0 | 0.0 | 263.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2892.1_44521.t1 | gi|325296931|ref|NP_001191490.1| | nicotinic acetylcholine receptor alpha 2 subunit precursor [Aplysia californica] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2892.1_44521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2892.1_44521.t1 atgaaagtatatgatagaaagacatgtgaacactttgtgatgatactgtgtttgtttgtgtgttgttttgtacggtttag tgagtgcaacgaagacgccaagagactgtaccacgacctgcttaaaaagtcctataacaagttgatacgacctgtgtcaa aaatttctgataaactgtacgtcaaaatggggatcaggctctctcagcttatagacatagatgagaagaatcaagtgatg accacaaacgtctggcttagacaggaatggactgagcgtcggcttcgttggaccccctctgagtatggtaacatgacaac catagaggtgccagctaatgatatatggactcctgatattgttctgttcaataatgccgatggtaactatgaagtaacgt tgatgacaaaggcaatcttacattccaatggatccgtggtctgggaacctccagctatttacaaaagttcttgtactata gatgtagagttcttcccctttgatatacagctttgtgtactgaaatttgggtcatggacatataatggacttcaagttga ccttgttcatttatgtgccaaggacaaggaatctactgacacaattttgaaaggaatcgatttacgagacttttatccca gtgttgaatgggatatacttgatgtcacagcaaagaaaaattacaatggctcagaatcatttccggacattacatttaac ataactatgagacgtaagaccctttttcacacagtgaaccttataattccttgtgttgctatttctttccttacggttct cgttttctatctccccagcgacagtggtgagaagattaccttgtgtatctccatactgctctcacttaccgtgttctttt tacttctagcggatattattccgccgacaagtagagttgttccattaatagggaaatatttattattcaccatgatttta gtgactttatccattcttgtcactgtgatcgtcttaaatgtacattttcgatcaccctctactcatacaatgtcaccatg ggtgcggagggttttcttaaatatccttccgcgcctgctcctgatgcggcgtccaaatttagacagtgaaaaaacaactc gaagtctgtccaagaattgcaatggtgtggaggtaacagactcttacaaacagctggtgtgtagacgttacaatccaatg gagggttgcttcctcagagccgtaccagagcaggatctgctgaccggtctacaggaaacagagaacatcattagacagcg caagtgtataccaaaggaaatcagagaagctgtagataacgtttgcttcattgcagaacatctaaggaaggaggacaggg aacgttcagtaatagaggactggaagtatgtggccatggtactggaccgtttgttcctgtggatatttacaacagcctgt gtggtggggacattcggcattattgtacaggcaccgaccatatacaacaacagtaacccactgactccacaggctccaaa tgatacatgtactaaactattttaa |
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Protein
| Protein ID | pfu_aug1.0_2892.1_44521.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2892.1_44521.t1 MKVYDRKTCEHFVMILCLFVCCFVRFSECNEDAKRLYHDLLKKSYNKLIRPVSKISDKLYVKMGIRLSQLIDIDEKNQVM TTNVWLRQEWTERRLRWTPSEYGNMTTIEVPANDIWTPDIVLFNNADGNYEVTLMTKAILHSNGSVVWEPPAIYKSSCTI DVEFFPFDIQLCVLKFGSWTYNGLQVDLVHLCAKDKESTDTILKGIDLRDFYPSVEWDILDVTAKKNYNGSESFPDITFN ITMRRKTLFHTVNLIIPCVAISFLTVLVFYLPSDSGEKITLCISILLSLTVFFLLLADIIPPTSRVVPLIGKYLLFTMIL VTLSILVTVIVLNVHFRSPSTHTMSPWVRRVFLNILPRLLLMRRPNLDSEKTTRSLSKNCNGVEVTDSYKQLVCRRYNPM EGCFLRAVPEQDLLTGLQETENIIRQRKCIPKEIREAVDNVCFIAEHLRKEDRERSVIEDWKYVAMVLDRLFLWIFTTAC VVGTFGIIVQAPTIYNNSNPLTPQAPNDTCTKLF |
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