Gene
| Gene Model ID | pfu_aug1.0_2894.1_30273 |
|---|---|
| Locus | scaffold2894.1 : 3506 ... 38476 : + |
| To GenomeBrowser | scaffold2894.1:3506..38476 |
| Genes list of scaffold | scaffold2894.1 |
| Synonym | pfu_aug2.0_1331.1_04970 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2894.1_30273.t1 | 1 | 1 | DNA_gyraseB | 10 | 143 | 3.6e-34 | 117.4 | 2.0e-37 | 7.3e-34 | 116.4 |
| pfu_aug1.0_2894.1_30273.t1 | 1 | 1 | Toprim | 174 | 284 | 1.7e-13 | 50.4 | 1.3e-16 | 4.9e-13 | 48.9 |
| pfu_aug1.0_2894.1_30273.t1 | 1 | 1 | DNA_topoisoIV | 297 | 392 | 1.1e-33 | 116.7 | 6.1e-37 | 2.2e-33 | 115.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2894.1_30273.t1 | gi|348502160|ref|XP_003438637.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2894.1_30273.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2894.1_30273.t1 atgcccctaaccctcgtacacgagatggctaacgatagatgggaggtagccgttactctcagtgataaaggattccaaca agtcagctttgtaaacagtatagccactacgaagggaggacgtcatgttgactatgtgacagaccaggtggtcaccaaac tcattgacattgtgaagaagaaaaataaagggggcgtcgccataaaaccattccagattaagaatcacatgtggattttt gtgaactgcctgattgagaacccgacgtttgactcccagactaaggagaacatgacactgcaggccaaaagtttcggttc taaatgtgctctgactgaaaaatatgttactcaggtcagtaaatgtggaattgttgaaagcattctaagttggatgaaat tcaaggctcaagcccagctgaataagaaatttagcagctccaagcattctaaactcaagggtattccaaaattagacgat gcaaacgatgcaggaaccagaaattctcgggagtgtaccctgatactgacagagggagattcagccaagtcgttggctgt agcaggactgggtgtggtggggagggaccgatttggagtgttccccctcaagggtaaagtgctcaacgtcagggaagcta cacacaaacagattatggacaatgctgaaatcaacaacatcgtcaagataatgggactccagtttaaggagaaatacaac gaccacgatgctttaaaatctctgcgctacggcaaactgatgataatgacagatcaggaccaggatgggtcacatatcaa ggggcttctcatcaactttatacaccacttctggccgaatctactcaagtttaatgtcgtggaagaatttatcactccga tcgtaaaggcttctctcatgggaacgatcatcaacttggctcagaacttcattggttctaacaacttgaacgtcctgcag ccgattggtcagtttggtacgcggttacatggaggaaaagacgcagctagtccccgttacatcttcacagcactgagtcc cctagccagagtgctgttcaacattcacgatgacccgttactggtgtataactatgacgacaatcttaaggtggaaccag agtggtacattcccataattcccatggttctggtgaacggggctgacggaatcgccaagaaaataaactacagtttcaac tcggatgatgaggaggcagtgcagtcagatagtgataacaatgacttccagccgacaaactttgacgagataaatagcgg gccggcccagatctccgatgctggcagtgatattgactcccctgttaaaactgtaccaaagaaagctgcaaagtcggcta tagaattcattccatcctcagacgatgaagaaaaagaatctcaagaatctgataaactttcctggctatctccggctaaa gaaaaagctccgggagagaaaaagccagcgaaacccaaatctaaagctgttaaacgacccgccaagaagattgacagtga ccttgacctttcagatgacgagttcgcaccaaaaaagagagctacaaagaagaagaaatcggcaggcagtgatgatgata gttttggattcggtggtgacgatggagacgaaggcatctcaatacccgcagaaccgagacgtggcgggggacgttctaag gctcctgtcaagtataactttggcgatgatgatgatgatgacgacgatgatgacttttaa |
|
Protein
| Protein ID | pfu_aug1.0_2894.1_30273.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2894.1_30273.t1 MPLTLVHEMANDRWEVAVTLSDKGFQQVSFVNSIATTKGGRHVDYVTDQVVTKLIDIVKKKNKGGVAIKPFQIKNHMWIF VNCLIENPTFDSQTKENMTLQAKSFGSKCALTEKYVTQVSKCGIVESILSWMKFKAQAQLNKKFSSSKHSKLKGIPKLDD ANDAGTRNSRECTLILTEGDSAKSLAVAGLGVVGRDRFGVFPLKGKVLNVREATHKQIMDNAEINNIVKIMGLQFKEKYN DHDALKSLRYGKLMIMTDQDQDGSHIKGLLINFIHHFWPNLLKFNVVEEFITPIVKASLMGTIINLAQNFIGSNNLNVLQ PIGQFGTRLHGGKDAASPRYIFTALSPLARVLFNIHDDPLLVYNYDDNLKVEPEWYIPIIPMVLVNGADGIAKKINYSFN SDDEEAVQSDSDNNDFQPTNFDEINSGPAQISDAGSDIDSPVKTVPKKAAKSAIEFIPSSDDEEKESQESDKLSWLSPAK EKAPGEKKPAKPKSKAVKRPAKKIDSDLDLSDDEFAPKKRATKKKKSAGSDDDSFGFGGDDGDEGISIPAEPRRGGGRSK APVKYNFGDDDDDDDDDDF |
|