Gene
| Gene Model ID | pfu_aug1.0_2894.1_30274 |
|---|---|
| Locus | scaffold2894.1 : 40736 ... 48832 : + |
| To GenomeBrowser | scaffold2894.1:40736..48832 |
| Genes list of scaffold | scaffold2894.1 |
| Synonym | pfu_aug2.0_3381.1_05820 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2894.1_30274.t1 | 1 | 1 | 2-Hacid_dh | 7 | 321 | 5.9e-33 | 113.1 | 3.3e-36 | 6.9e-33 | 112.9 |
| pfu_aug1.0_2894.1_30274.t1 | 1 | 1 | 2-Hacid_dh_C | 112 | 290 | 0.0 | 193.3 | 0.0 | 0.0 | 192.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2894.1_30274.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2894.1_30274.t1 atgtcttcaaaaccgaaagtatacattacacgcaaagtgccagtggagggagtgcgtcttttgacagagcactgtgaagt gacgcattgggacagagaggacgcggtgccacgcgctgaactcctcaagaatgtgtcagggatggacgctctgttctgtc tcctgacagaaaaggtggacgctgaggttcttaatgctgcaggaccacaactgaagtgtgtagccaccatgtcagtgggc tatgaccacattgatcttgctgagtgtaagaagcgtgggatatctgtgggcttcactcctgacgtgctgaccaatgctgt ggccgaactgaccttggctttattactggccacatcacgcaggctgaaggaaggtatgaatgcagtaattcaaggtaaat ggggaacttggaatccaatatggctcctgggaagcggtctagatggcgccactgtgggagtagtcggactcgggagaatt ggatttgaggtcgttaaaaggcttcatccatttggagtggccaaagttctatattcagatgtggagccgaaatcctatgc taaagacataaacgcagagtatgcgactttggacgatcttttgaagacgtccgattttgtactgggttgttgcgcattaa cgaaggaaaatatgggacttttcaacaaagacgctttcagtaaaatgaaaaatactgcaatatttgtcaacacaagtaga gggggtcttgtcaaccaggatgatctatacaccgctttatcaaccaatcagattgctggggcgggacttgatgtgaccaa tcctgagccattacccacagatagtcctctacttaaacttgagaactgcatcgttctacctcatattgcaagcgccacaa tcaaatcacgaagtgcgatgtctgaacttacaggacaaaacattctagcttgtttaaacggcaagaaaatgctcgctcaa gtggttgtttaa |
|
Protein
| Protein ID | pfu_aug1.0_2894.1_30274.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2894.1_30274.t1 MSSKPKVYITRKVPVEGVRLLTEHCEVTHWDREDAVPRAELLKNVSGMDALFCLLTEKVDAEVLNAAGPQLKCVATMSVG YDHIDLAECKKRGISVGFTPDVLTNAVAELTLALLLATSRRLKEGMNAVIQGKWGTWNPIWLLGSGLDGATVGVVGLGRI GFEVVKRLHPFGVAKVLYSDVEPKSYAKDINAEYATLDDLLKTSDFVLGCCALTKENMGLFNKDAFSKMKNTAIFVNTSR GGLVNQDDLYTALSTNQIAGAGLDVTNPEPLPTDSPLLKLENCIVLPHIASATIKSRSAMSELTGQNILACLNGKKMLAQ VVV |
|