Gene
| Gene Model ID | pfu_aug1.0_2894.1_30275 |
|---|---|
| Locus | scaffold2894.1 : 48899 ... 73915 : - |
| To GenomeBrowser | scaffold2894.1:48899..73915 |
| Genes list of scaffold | scaffold2894.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2894.1_30275.t1 | 1 | 1 | G8 | 18 | 130 | 2.4e-24 | 85.5 | 3.0e-28 | 4.4e-24 | 84.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2894.1_30275.t1 | gi|301605317|ref|XP_002932302.1| | 4.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2894.1_30275.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2894.1_30275.t1 atgtgcaactattcattgatcaacataatactaaatatccttacctttcagacacctggtgccaatcagaatgttacaat cacaaggcccactctactggacaccacacctccggaactttttagtataacgatagaatcaggcgggcggttagtgtggg gtagcgatggagactacagcctgcgactccactatatcctcgtcaagtcaggcggagaaatgcacattggatctgaggac tgtaaattctctgccaaggcttccattactttacttggtgagcctggggaattggacatcactggttttggcgaaaagtt catcggagtgcaattaggcggaacattggaactgcatggacaagataagctgtcctggacaaaagttaccaaaactgttc cgaaatttgatttgtcagtggggcaaaagtttggacacaaggaacttgagggtacacagcactgggacggagtgtttgct taccaattcacaccagatggcacctacgtgaaccgattgttccggtccatttcacacaaccgacagaaatctgtggactg gaacatcggcaaactgaagaaattcatggatggtgttgctgatggcaacatattggcctttgctacacagagagaccaca ataggaaaggaagtgaccacagcgccctctatgacctgatagatagcgtagccgggcctaataaattacgacagattggc tctaagtctgcctatgctcttgttacagtgaaaggtcagccatccagtactgtagattcattaagtcacgtggatcttaa ctcaaattccaattccgcgtacgctagagtggagagggcaatgacagtgaacggagaggatctacaattagttgtggagt cgtactataacgccagacgacgatggatggggtatagtaacttcagggtgatggacactaagtactcaaatccaatcatc gatttagtagatgaaccaaggggatggaaagcagtttttgaaaggattcaagagtgtcagagtggaaggggtggagctaa caaagatgggacagccaatgaaactagaactgcaaccacattctggttgacaaatccaaagacaactctaattggaaatg tagcagctggtggagatggtgccggcatgtggtttgtttacccagatatacctactggcccatcaagtacaatgaacctt atggcagagagggaagcccgccgtaccaaaatcacaaagtttgaaaacaatgtgtgccactcatacaataagcaccgaga acagcgtttgctgtcccttttcgagacgaagccgcttcttcggcggcataacagtctgtttgacaaaaaccgtagtttga aaattcccgctatcgatattattgatcacccaacagcaagagagcagggacttttccgtcatcttgagaatagtgtaatc attggagaatctaaaaacactggtgaaccagaaagagtgagactgagggacggctctagaatggagtggcaccgctcagt tcctgcaccatgggacatgaaccatcccagaggtggatacagactcctacatggaccagaaaaacttcacaacgttttct ttgacggttttaagagcactgatttgtaccctgctggtgctatgatgttcaggagatgtaagaaatcgacaacggcacga tccaacgctaataatatcagatttggatttgatgactcggcaggaactggtaacagatacatggacaattcaacagtaga ctcttgtcctaatgatgccgaatttgaccttaacatggtggccgtcactgcgagcgacgggtcaaggtcacaggttgtca acaactcgcctttcctcacaaccagccagtgctcagtcagggacaactggaatttggcatcctgcccacataattatgca caggtagaggctcgatacagtggtgacgatgaattcacagtgatgaggacangacgccccccacccatcctacaccactg a |
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Protein
| Protein ID | pfu_aug1.0_2894.1_30275.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2894.1_30275.t1 MCNYSLINIILNILTFQTPGANQNVTITRPTLLDTTPPELFSITIESGGRLVWGSDGDYSLRLHYILVKSGGEMHIGSED CKFSAKASITLLGEPGELDITGFGEKFIGVQLGGTLELHGQDKLSWTKVTKTVPKFDLSVGQKFGHKELEGTQHWDGVFA YQFTPDGTYVNRLFRSISHNRQKSVDWNIGKLKKFMDGVADGNILAFATQRDHNRKGSDHSALYDLIDSVAGPNKLRQIG SKSAYALVTVKGQPSSTVDSLSHVDLNSNSNSAYARVERAMTVNGEDLQLVVESYYNARRRWMGYSNFRVMDTKYSNPII DLVDEPRGWKAVFERIQECQSGRGGANKDGTANETRTATTFWLTNPKTTLIGNVAAGGDGAGMWFVYPDIPTGPSSTMNL MAEREARRTKITKFENNVCHSYNKHREQRLLSLFETKPLLRRHNSLFDKNRSLKIPAIDIIDHPTAREQGLFRHLENSVI IGESKNTGEPERVRLRDGSRMEWHRSVPAPWDMNHPRGGYRLLHGPEKLHNVFFDGFKSTDLYPAGAMMFRRCKKSTTAR SNANNIRFGFDDSAGTGNRYMDNSTVDSCPNDAEFDLNMVAVTASDGSRSQVVNNSPFLTTSQCSVRDNWNLASCPHNYA QVEARYSGDDEFTVMRTXRPPPILHH |
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