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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_289500.1_28800
Locus scaffold289500.1 : 1 ... 553 : -
To GenomeBrowser scaffold289500.1:1..553
Genes list of scaffold scaffold289500.1
Synonym pfu_aug2.0_360.1_00650

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_289500.1_28800.t1 1 1 Chromo 124 161 3.0e-09 36.4 1.4e-12 6.9e-09 35.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_289500.1_28800.t1 gi|221111526|ref|XP_002155540.1| 2.0e-36

Transcript
Transcript IDpfu_aug1.0_289500.1_28800.t1
Definition-
>pfu_aug1.0_289500.1_28800.t1
ttcgaagtacattgatgttttggaggatttggtgtattcatacaaccatactcatcacaggagtataaaaatggctccag
tacatgcaacaaaaaagaatgaaatcatagtttggaaaaatctctatgacgacaaagctttggatgtcaaaaacaccacc
ctgaaaataggagatcaggttcgaattagcaaagcaagacgggcatttaagaaaggttacttgcctagctggagcgaaga
aatattttctgttagtgaagtgcgtgaacgtcagccacctgtgtatcgcatcaatgactacaatggcgaaccgttgaaag
gaacattttatcctcaagagttacaaaaaatcgttaaatctgatgacgtatacagaattgaagaggtgttacagaaaaga
aagaaaggaaagcagattcaatatcttgtcaagtggcatggatatcccgaatcattcaacagttggatcaacagaaatca
gttgactacatataaaggatag

Protein
Protein IDpfu_aug1.0_289500.1_28800.t1
Definition-
>pfu_aug1.0_289500.1_28800.t1
SKYIDVLEDLVYSYNHTHHRSIKMAPVHATKKNEIIVWKNLYDDKALDVKNTTLKIGDQVRISKARRAFKKGYLPSWSEE
IFSVSEVRERQPPVYRINDYNGEPLKGTFYPQELQKIVKSDDVYRIEEVLQKRKKGKQIQYLVKWHGYPESFNSWINRNQ
LTTYKG

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