Gene
| Gene Model ID | pfu_aug1.0_2899.1_66495 |
|---|---|
| Locus | scaffold2899.1 : 22856 ... 28475 : + |
| To GenomeBrowser | scaffold2899.1:22856..28475 |
| Genes list of scaffold | scaffold2899.1 |
| Synonym | pfu_aug2.0_2027.1_25256 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2899.1_66495.t1 | 2 | 1 | C1q | 35 | 68 | 2.1e-11 | 43.9 | 0.076 | 1100.0 | -0.5 |
| pfu_aug1.0_2899.1_66495.t1 | 2 | 2 | C1q | 65 | 135 | 2.1e-11 | 43.9 | 3.4e-15 | 5.0e-11 | 42.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2899.1_66495.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2899.1_66495.t1 atgcgattccttacgttcagtcttcattttctgttgctgaccatgtttgtttctggcaaccgttgccatagaaacgtaga tgcttttgtgagaaggatatttaaaggagtaaaactttcaatggaccaagatgatattgttgcgcttacagatatgaaag ctggttcttgtgtattggcaaagaggatttatttctctgcgtacctcacgagccacacaaaatcctcaagtctcaagaga aaccaaccaataatatacactgacgtcgtaaccaatgagggcggagcatacagttccagcacgggcgaattcacggcacc aagatccggaggatatacatttttctgggagtttttggtatatccaaacggaaatatatggctagagttacaagtcaaca acaaattgtttgctataaccttgcccatgggtcagattcattttacgaattag |
|
Protein
| Protein ID | pfu_aug1.0_2899.1_66495.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2899.1_66495.t1 MRFLTFSLHFLLLTMFVSGNRCHRNVDAFVRRIFKGVKLSMDQDDIVALTDMKAGSCVLAKRIYFSAYLTSHTKSSSLKR NQPIIYTDVVTNEGGAYSSSTGEFTAPRSGGYTFFWEFLVYPNGNIWLELQVNNKLFAITLPMGQIHFTN |
|