Gene
| Gene Model ID | pfu_aug1.0_290.1_22122 |
|---|---|
| Locus | scaffold290.1 : 7166 ... 13457 : + |
| To GenomeBrowser | scaffold290.1:7166..13457 |
| Genes list of scaffold | scaffold290.1 |
| Synonym | pfu_aug2.0_1263.1_11551 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_290.1_22122.t1 | 1 | 1 | Pro_isomerase | 63 | 214 | 2.5e-39 | 134.9 | 4.30199e-43 | 3.2e-39 | 134.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_290.1_22122.t1 | gi|115623527|ref|XP_780918.2| | PREDICTED: peptidyl-prolyl cis-trans isomerase B isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_290.1_22122.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_290.1_22122.t1 atgaaaacagtcctgtttcttctcgcttgccttggcttcatgtcggtcagtttcgccgaggactgggattcggactccga atctgactcaaaggacacaaaggaagaagacgctaactacaaagtcacggatgaggcgtggtttgatattgagattaaag attatcccgaggaaggagaagactataagggaagattcaccattggtctctttggagatgtttgtccaatgacaatctta aacttcaagtcgcttgttaaaggtttcaaaagaggaaagaaaacactgacgtacaagaaatcccccatccatcgtatcgt cagagacttcatcatccagatgggcgacgttacaataggagacgggacaggaggtgaaagtatattcggagctaaatttg gtgacgagaaccatataatcagccacaaagctgcagggtacgtttcaatggccaaccacggacctgacagtaacggttca caattctttataacgctgctcaaaacaagatggctcgatggaaaacacgttgcttttggaaaagttgtctccggcatgga cgttgtacggacgcttggagaagtaccagccaatgcaaatactgctgtaccaaagaattcaattagaataatagattgtg gtctaaacactgtatcaaagccatacactctaaaaaagaaagaagcagaatccgatgatgacctgtag |
|
Protein
| Protein ID | pfu_aug1.0_290.1_22122.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_290.1_22122.t1 MKTVLFLLACLGFMSVSFAEDWDSDSESDSKDTKEEDANYKVTDEAWFDIEIKDYPEEGEDYKGRFTIGLFGDVCPMTIL NFKSLVKGFKRGKKTLTYKKSPIHRIVRDFIIQMGDVTIGDGTGGESIFGAKFGDENHIISHKAAGYVSMANHGPDSNGS QFFITLLKTRWLDGKHVAFGKVVSGMDVVRTLGEVPANANTAVPKNSIRIIDCGLNTVSKPYTLKKKEAESDDDL |
|