Gene
| Gene Model ID | pfu_aug1.0_29046.1_55289 |
|---|---|
| Locus | scaffold29046.1 : 114 ... 24397 : - |
| To GenomeBrowser | scaffold29046.1:114..24397 |
| Genes list of scaffold | scaffold29046.1 |
| Synonym | pfu_aug2.0_14.1_13405 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_29046.1_55289.t1 | 2 | 1 | EGF | 206 | 231 | 4.8e-11 | 42.4 | 2.2e-06 | 0.0064 | 16.4 |
| pfu_aug1.0_29046.1_55289.t1 | 2 | 2 | EGF | 240 | 265 | 4.8e-11 | 42.4 | 1.0e-10 | 3.0e-07 | 30.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_29046.1_55289.t1 | gi|321466278|gb|EFX77274.1| | notch 2 [Daphnia pulex] | 8.0e-23 |
Transcript
| Transcript ID | pfu_aug1.0_29046.1_55289.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29046.1_55289.t1 gtgccacatgtccagcagagaattggcagtcccagagtcttgtcaatagtccgcagtctgttgtccctaatacggcagtg aactaccttgactatgtcaatatcacatgtaacgtacaaggacggggaacattcgtcaagcaacgtcattgtctgtatga caaaccaactaactcctacaaactttatggggacgagtacgaatgtggagtgattgattgtggtagtccaggccaagagc caaatacaaactatcctttgccagcccaaactacatatggaaatacatttaactatacttgtgctgcacttatggctctc agtggaaactctagccttggtaacagcttagtcacctgtatggccaatggtaactgggatttcggatccttacagtgtct aggttctagctgtccagatcccggctacccaaatggtggttatcaagtagccacctcgtatgctaaaaattctatcgtaa cgtttggatgtaaccgtacaggctacgagttgactttcaccgagggacttgagtgcatcgttaatcaggctggtaatggg ctggagtggaataacacaaacagaccacagtgtgtcgttactgctgagtgtgaaggaagatgtcagaatggagcccagtg tgtagtccaggaccatcaagtccaatgtttgtgctcggcaggctactatggtagtcagtgtaatatccaggttgataact gtctgtcgagaccatgttataatgggggcgtctgtgttaatggcgttaattcctatacctgtaactgtccaacaggtgtg agagccagcagaatatttgtgtacaacagccgtgtagtaacggagcaagatgtatcagtctggataatgtccgaagacga tgtgaatgcttggacggttacgaaggtgtcagctgtcaaaccaacatcatcctgtgttcgatttgtgcagatatctgacg taaaagcattgtga |
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Protein
| Protein ID | pfu_aug1.0_29046.1_55289.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29046.1_55289.t1 ATCPAENWQSQSLVNSPQSVVPNTAVNYLDYVNITCNVQGRGTFVKQRHCLYDKPTNSYKLYGDEYECGVIDCGSPGQEP NTNYPLPAQTTYGNTFNYTCAALMALSGNSSLGNSLVTCMANGNWDFGSLQCLGSSCPDPGYPNGGYQVATSYAKNSIVT FGCNRTGYELTFTEGLECIVNQAGNGLEWNNTNRPQCVVTAECEGRCQNGAQCVVQDHQVQCLCSAGYYGSQCNIQVDNC LSRPCYNGGVCVNGVNSYTCNCPTGVRASRIFVYNSRVVTEQDVSVWIMSEDDVNAWTVTKVSAVKPTSSCVRFVQISDV KAL |
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