Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_290583.1_14384
Locus scaffold290583.1 : 1 ... 551 : -
To GenomeBrowser scaffold290583.1:1..551
Genes list of scaffold scaffold290583.1
Synonym pfu_aug2.0_35.1_16767

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_290583.1_14384.t1 gi|156355996|ref|XP_001623718.1| predicted protein [Nematostella vectensis] 3.0e-11

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-Dshape 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_290583.1_14384.t1
Definition-
>pfu_aug1.0_290583.1_14384.t1
cttcatttttgaaggaaaatatgaaattaaaacgattcaatgtatcatggaacggtttggatgacggaggagccaaggcg
tttggggactgtatagcccataatgcagtactgaaggaacttgacgtgacgtgtaccaggatcggagcggtgggctttgt
ttctatcataaatgggttgtgcaaaaacgaagatcttgatgttattagaattggcaagaacaacttacttgaggagtacg
tgaaggcagctttcttaccacttatggaactacagtcactcaagcttactctcctagatctatcg

Protein
Protein IDpfu_aug1.0_290583.1_14384.t1
Definition-
>pfu_aug1.0_290583.1_14384.t1
SFLKENMKLKRFNVSWNGLDDGGAKAFGDCIAHNAVLKELDVTCTRIGAVGFVSIINGLCKNEDLDVIRIGKNNLLEEYV
KAAFLPLMELQSLKLTLLDLS

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