Gene
| Gene Model ID | pfu_aug1.0_2914.1_37447 |
|---|---|
| Locus | scaffold2914.1 : 20336 ... 39654 : + |
| To GenomeBrowser | scaffold2914.1:20336..39654 |
| Genes list of scaffold | scaffold2914.1 |
| Synonym | pfu_aug2.0_10.1_00011 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2914.1_37447.t1 | 1 | 1 | vATP-synt_AC39 | 83 | 254 | 2.10055e-42 | 145.4 | 0.0 | 2.49992e-42 | 145.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2914.1_37447.t1 | gi|91083331|ref|XP_974905.1| | PREDICTED: V-type proton ATPase subunit d [Tribolium castaneum] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2914.1_37447.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2914.1_37447.t1 atgtttaatttcgtgctctattcgttccgttctcgcactatgatgcatataaacatcaaatccaaatcaaggccaaatct tgagaattcccatcggaacggctctcatggctgcatgcaatacccgttgcaacagctacgtggaaacctgtcaaattcgg tgattgtctcgatgtacattttgatgtacagatcagtttttgtgctcatgtttaacgtatacatcgttgtcttgctgaga atttcaaacaataagatattttcaaagaatagtcaaaaggcctatttggaggatttctacgcattttgtaaagaactagg gggagcaactgctgatgtcatgtgtgaggcactcgcttttgaagcagacagaagagcgtttatcataacgataaattcgt tcggtacagagttgacgaaggaggaccgagccaagctgtatcctcgttgtggtaaccttaacccgtacggactctcttta ctggccagggccgatgacgtagatcaagtcagacaggtggccgagtattacgggaaatacaaggagatatttgaaggaag tggatcaggtcctggagataaaaccttagaggacaagttctttgaattcgaggtcaacttgatgaagaattccttcatgc agcagtatcagttcggggcattctacgcgtttgtcaagttaaaggaacaggaaaaccgaaatataatttggatctccgaa tgtgtcgcacagcgtcatcgagccaaaatagacagctacattcccatattctga |
|
Protein
| Protein ID | pfu_aug1.0_2914.1_37447.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2914.1_37447.t1 MFNFVLYSFRSRTMMHINIKSKSRPNLENSHRNGSHGCMQYPLQQLRGNLSNSVIVSMYILMYRSVFVLMFNVYIVVLLR ISNNKIFSKNSQKAYLEDFYAFCKELGGATADVMCEALAFEADRRAFIITINSFGTELTKEDRAKLYPRCGNLNPYGLSL LARADDVDQVRQVAEYYGKYKEIFEGSGSGPGDKTLEDKFFEFEVNLMKNSFMQQYQFGAFYAFVKLKEQENRNIIWISE CVAQRHRAKIDSYIPIF |
|