Gene
| Gene Model ID | pfu_aug1.0_2917.1_30278 |
|---|---|
| Locus | scaffold2917.1 : 161 ... 24168 : + |
| To GenomeBrowser | scaffold2917.1:161..24168 |
| Genes list of scaffold | scaffold2917.1 |
| Synonym | pfu_aug2.0_14.1_13376 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2917.1_30278.t1 | 1 | 1 | Peptidase_M1 | 31 | 173 | 7.8e-11 | 41.6 | 3.6e-14 | 1.8e-10 | 40.4 |
| pfu_aug1.0_2917.1_30278.t1 | 2 | 1 | HEAT_2 | 222 | 273 | 1.4e-07 | 31.6 | 1.8e-06 | 0.0089 | 16.2 |
| pfu_aug1.0_2917.1_30278.t1 | 2 | 2 | HEAT_2 | 454 | 499 | 1.4e-07 | 31.6 | 2.4e-05 | 0.12 | 12.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2917.1_30278.t1 | gi|328787388|ref|XP_393397.4| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 2 |
| 8-16cell | 2 |
| egg-Dshape | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2917.1_30278.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2917.1_30278.t1 atgcgtcccttcaagttgtcgatagagttttcactagaaatgcccaaaggtggagttcactttgtaatgccggacattga gggtagtttagtggaaagggctgctcacatgtttacttatggacatagtaatgcatcaaggttatggtttccctgcatag acacatactcagagccatgtacctggaagcttgagataacagtagatctacatatgacagctgtatcatgtggtgatctt atagaagtcatcgctacaccagacagaaaacgtaaaaccttccactacttcttatctaacccaacggcagcaccaaacat tgctctggctgtcgggccctttgagattctggtggaccctaacatgcacgaggtaacccatttctgtctaccacacctta ctgacatcctgaagcaaactacaggctacattcatgaggcgtttgagttttatgaagagttactatccagtagatatcca tactcctgttataaacaggtctttgtggacgagagttatgatgaagttgcatcatatgctaccatgactatttttagtgc cgactcaccagttttatggcttcgagttgacccagatatgaacttgctaagtcatgtgacctgggaacaacctgattata tgtggcaatatcaactcaagtttgagagagatgtcgtggctcagaaagaggctatagatgctctgataaactaccctacc acagctacaaggaaagccttaacggacattctcgagaatgaacattgtttttacagagtcaggatggaggctgcttattg tctagccaaggtagctaattccatggtcagtagtgcttggaatggtcctccagccatgatgacaattttccgtaagctgt tcggttcccactcatgtcctgccattatcagacaaaacaatttctcaaactttcagcattattttcttctcaagactatc ccccttgccatggccttactaaggaatataaacaccatgtgcccacctgatgtgttttatttcatcatggagctgttcaa atataatgacaatagcaggaacaagtattcagacaactactatagagctgccctagttgatgctgcagctacaactgtca caccagctataacactgatgtcagcaacagggaagggaccaagctcggagaatttatcagttgagaccaaacagatcttg gaggagattacacggtaccttaacctggataaattattaccgtgttacagacatacagttactgtcagttgtctaagagc tatccggacactacagaagtttggccacttgccgagtgaagttgaattctttaagagttacgcagtacatggtgtattca gggacgttagacaggctgccatagaggctgttgtggatttcatcagaacggagtccagaccagaagatttgtactggctt cttgagatggtggaacaagacccagatatgtacatgaggcattttgtgctgagtcagctggtagtaaatccaccatttcg tcgtgtagattccagctcactacacacagagggtcttgtagaaagattatggaaaatgatgaattgtacattttcctacg atagccgactgcgatgtgatattgctgatctgtatttcacgttatatggcaggatacgacccacctgtctaactatacca gagaatatgctggtgttaaacttaaaaaacaacagaaacagaatgagtgcttcatttgatccaaatgaggattttgagga agatgatgatgaggaggaggaggaagaggaacgaggtttggatgtgagcacctcacagatggacaccgagtctgaggtta acgttacggacatccactcagtcgaggagaccggtcagaaacggcaagccacatcaccgctgtcaccacaagttatgtcc cttggttctgtgccagagacatgtcctgaaggaatttttaatgaggacagctctcagtctaaaaagttaaagttaacggt gaagcgagaggagcttgagagcatgcagtcggatcctcctgtcactgatgtctcacaaactcccacccagcaagccccgc ccaccctgtcaggactacccgtccctttgttaccacagagttccttcaccatggatacatcctccaggctgagtgaaggg tcgtcatcccctgtagaaactcccatcaaatcagagccagtatcgggtcccacctccttctctggtctgttaccgctaac gtccacgcctgctccaccctcgtcagtcaggttgtcagggtccgatgtcaaggaagaacccggtgcaaaatcacacaaag tcaaaaagaagaaaaagaaaaacaaacacaagcacaaacataaacacaagcacgataaacctgagaaagaactgttagag aaagcacgagaaggacatagctctggtactagtacagtgaactctccacaagtgacatcaaaccaagacccacctagctc tccagaatatggaatcatctaa |
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Protein
| Protein ID | pfu_aug1.0_2917.1_30278.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2917.1_30278.t1 MRPFKLSIEFSLEMPKGGVHFVMPDIEGSLVERAAHMFTYGHSNASRLWFPCIDTYSEPCTWKLEITVDLHMTAVSCGDL IEVIATPDRKRKTFHYFLSNPTAAPNIALAVGPFEILVDPNMHEVTHFCLPHLTDILKQTTGYIHEAFEFYEELLSSRYP YSCYKQVFVDESYDEVASYATMTIFSADSPVLWLRVDPDMNLLSHVTWEQPDYMWQYQLKFERDVVAQKEAIDALINYPT TATRKALTDILENEHCFYRVRMEAAYCLAKVANSMVSSAWNGPPAMMTIFRKLFGSHSCPAIIRQNNFSNFQHYFLLKTI PLAMALLRNINTMCPPDVFYFIMELFKYNDNSRNKYSDNYYRAALVDAAATTVTPAITLMSATGKGPSSENLSVETKQIL EEITRYLNLDKLLPCYRHTVTVSCLRAIRTLQKFGHLPSEVEFFKSYAVHGVFRDVRQAAIEAVVDFIRTESRPEDLYWL LEMVEQDPDMYMRHFVLSQLVVNPPFRRVDSSSLHTEGLVERLWKMMNCTFSYDSRLRCDIADLYFTLYGRIRPTCLTIP ENMLVLNLKNNRNRMSASFDPNEDFEEDDDEEEEEEERGLDVSTSQMDTESEVNVTDIHSVEETGQKRQATSPLSPQVMS LGSVPETCPEGIFNEDSSQSKKLKLTVKREELESMQSDPPVTDVSQTPTQQAPPTLSGLPVPLLPQSSFTMDTSSRLSEG SSSPVETPIKSEPVSGPTSFSGLLPLTSTPAPPSSVRLSGSDVKEEPGAKSHKVKKKKKKNKHKHKHKHKHDKPEKELLE KAREGHSSGTSTVNSPQVTSNQDPPSSPEYGII |
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