Gene
| Gene Model ID | pfu_aug1.0_2917.1_30280 |
|---|---|
| Locus | scaffold2917.1 : 39421 ... 46645 : - |
| To GenomeBrowser | scaffold2917.1:39421..46645 |
| Genes list of scaffold | scaffold2917.1 |
| Synonym | pfu_aug2.0_14.1_13374 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2917.1_30280.t1 | 1 | 1 | ELO | 3 | 187 | 1.3e-38 | 132.7 | 1.3999e-42 | 2.1e-38 | 132.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2917.1_30280.t1 | gi|196004584|ref|XP_002112159.1| | hypothetical protein TRIADDRAFT_24481 [Trichoplax adhaerens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2917.1_30280.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2917.1_30280.t1 atgatgttcctgatcgtccataactttgcctgtagcagtatcagtgtgtattgtttaggaggatttatgtacctactgtc ccagagtcagtccacgtttgagaagggatcctcagaatcattccaaccgtactttcacatgtattacatcaccaagttga tcgagctcctggacaccatctttatgattctacggcacaagcagcgacagatcagtttccttcacgtgtaccatcacagc tcgatgctcctacttagtgatatagcataccatgtgtacccatggccagccatatctgtctatctggcagttaattcctt cgtacatattgttttatacctttactacggcttgacagctctgtttcccgaaaaatcatttccatggaaacagcatctga cagaattacagatattacagtttatggtgttgttcgtccatgctactgtaggatatttatatcatgggttttgtatatac ggcatattttatggtataactatgacatcgctttttatgaacttttactacagggcttacctagcaccaaggaaaggaaa gccccattcctcctaa |
|
Protein
| Protein ID | pfu_aug1.0_2917.1_30280.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2917.1_30280.t1 MMFLIVHNFACSSISVYCLGGFMYLLSQSQSTFEKGSSESFQPYFHMYYITKLIELLDTIFMILRHKQRQISFLHVYHHS SMLLLSDIAYHVYPWPAISVYLAVNSFVHIVLYLYYGLTALFPEKSFPWKQHLTELQILQFMVLFVHATVGYLYHGFCIY GIFYGITMTSLFMNFYYRAYLAPRKGKPHSS |
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