Gene
| Gene Model ID | pfu_aug1.0_292064.1_64953 |
|---|---|
| Locus | scaffold292064.1 : 1 ... 548 : + |
| To GenomeBrowser | scaffold292064.1:1..548 |
| Genes list of scaffold | scaffold292064.1 |
| Synonym | pfu_aug2.0_4.1_13360 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_292064.1_64953.t1 | 1 | 1 | Glycos_transf_1 | 2 | 91 | 1.6e-25 | 89.5 | 2.5e-29 | 1.9e-25 | 89.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_292064.1_64953.t1 | gi|260811476|ref|XP_002600448.1| | hypothetical protein BRAFLDRAFT_70178 [Branchiostoma floridae] | 2.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_292064.1_64953.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_292064.1_64953.t1 tagaaaacaaggaatattataaagagctacaacaactagcagaaaatttacaatgtagtgataatgtcacgttcctgaga tcattctctgacagtcaaaagaggactctcctgaaaaacgtcagctgtttgttatacactccacagaacgagcattttgg tatcgtacccatagaagctatgtacatgaaatgtcccgtaatagcggccaacagtggaggtccactggaaacagttgtga ataatgagaccggattcctttgcgaccccaaaagcggagcatttttctacagcaatgataaagtttaccagagacaaaaa tcttag |
|
Protein
| Protein ID | pfu_aug1.0_292064.1_64953.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_292064.1_64953.t1 ENKEYYKELQQLAENLQCSDNVTFLRSFSDSQKRTLLKNVSCLLYTPQNEHFGIVPIEAMYMKCPVIAANSGGPLETVVN NETGFLCDPKSGAFFYSNDKVYQRQKS |
|