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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_29239.1_47921
Locus scaffold29239.1 : 1 ... 6473 : +
To GenomeBrowser scaffold29239.1:1..6473
Genes list of scaffold scaffold29239.1
Synonym pfu_aug2.0_1882.1_08628

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_29239.1_47921.t1 2 1 SDF 77 143 6.2e-07 28.5 8.6e-10 1.3e-05 24.1
pfu_aug1.0_29239.1_47921.t1 2 2 SDF 139 162 6.2e-07 28.5 0.00049 7.3 5.2

Transcript
Transcript IDpfu_aug1.0_29239.1_47921.t1
Definition-
>pfu_aug1.0_29239.1_47921.t1
gtgatcaagaacaacttgttatttgttcttactatggtcggtattatagtgggatttatattgggatttggaataaggga
acttcagccatccaaaaatgcccttatgtggatcgcacctataggtacaatgtacttagaattccactggattcatttac
aaagaaaaggaaaattccatgtgctcatcatgaagattcgcacaacgaacacatagatctacaatgtacagcgtccctcg
acccaaggtctaatggcaagatcagcgggatatcttttacatatatcattcttaccaacgccctcggttgtcttattgct
gtagctctatcattcgtcttcaaaccagggatatcaagcgaaactgtgatacaaagcaagaaaactgaaagactggattc
agaagatatcttcgctgatttgttaagagatcgtatacggaccaccagtaatcttgttagccacacgttttgtgcagcaa
taacttaccaattctgtaaaaaagatctggagaaaactaacgacactactaaacaatatacagatgttgaattagaagtg
gtggaatactga

Protein
Protein IDpfu_aug1.0_29239.1_47921.t1
Definition-
>pfu_aug1.0_29239.1_47921.t1
DQEQLVICSYYGRYYSGIYIGIWNKGTSAIQKCPYVDRTYRYNVLRIPLDSFTKKRKIPCAHHEDSHNEHIDLQCTASLD
PRSNGKISGISFTYIILTNALGCLIAVALSFVFKPGISSETVIQSKKTERLDSEDIFADLLRDRIRTTSNLVSHTFCAAI
TYQFCKKDLEKTNDTTKQYTDVELEVVEY

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