Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2926.1_51834
Locus scaffold2926.1 : 9997 ... 19445 : -
To GenomeBrowser scaffold2926.1:9997..19445
Genes list of scaffold scaffold2926.1
Synonym pfu_aug2.0_253.1_10509

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2926.1_51834.t1 1 1 PALP 3 153 3.5e-29 102.0 5.2e-33 3.9e-29 101.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2926.1_51834.t1 gi|337268743|ref|YP_004612798.1| 1.0e-32

Transcript
Transcript IDpfu_aug1.0_2926.1_51834.t1
Definition-
>pfu_aug1.0_2926.1_51834.t1
atgtgctgaaatggtacaataggcttagaaatctacgaggatttaccagatgtggacgtagttatctgcccttatggagg
aggtggcctcataacaggggtagcttctgcagtgaaagcgttgaagcccgacatcaaggtttatgctacggaggttgaca
cagcctgtcctctacgatcctcctttgatttgggcaagccaacatcatgtaatttcatccgtagctttgttgatgggatg
ggaggaaaatctatactgccagaaatgtggccactagtgaagaatctggtagaggattctattgttgttacattacaaga
ggtaacaaattctatcaaactattggccgagaggaatcatgtgattgctgagggagcaggtgctgccactgtggctgctg
cgttatgtgaggaatcggagagaaaacttcatggtaacatagtctgtgtcatatctgggggtaacattgatacagataaa
ttaatacaaacactggaaggtgtgattccaaaaatggaatag

Protein
Protein IDpfu_aug1.0_2926.1_51834.t1
Definition-
>pfu_aug1.0_2926.1_51834.t1
MCXNGTIGLEIYEDLPDVDVVICPYGGGGLITGVASAVKALKPDIKVYATEVDTACPLRSSFDLGKPTSCNFIRSFVDGM
GGKSILPEMWPLVKNLVEDSIVVTLQEVTNSIKLLAERNHVIAEGAGAATVAAALCEESERKLHGNIVCVISGGNIDTDK
LIQTLEGVIPKME

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495