Gene
| Gene Model ID | pfu_aug1.0_2926.1_51836 |
|---|---|
| Locus | scaffold2926.1 : 29184 ... 30834 : - |
| To GenomeBrowser | scaffold2926.1:29184..30834 |
| Genes list of scaffold | scaffold2926.1 |
| Synonym | pfu_aug2.0_253.1_10508 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2926.1_51836.t1 | 1 | 1 | DUF2373 | 215 | 279 | 7.7e-22 | 76.6 | 2.4e-25 | 1.8e-21 | 75.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2926.1_51836.t1 | gi|226443290|ref|NP_001140101.1| | CG050 protein [Salmo salar] | 2.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2926.1_51836.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2926.1_51836.t1 atggcggggaagggaaagttaaaacatatacatacacctaaatatgaaaatatgatggatggggttggttcagattacaa agaaaagaagaaaaaatatgatgaatcgtcaccaaagataaacacagaaactgtaaatgtggataaaaagcatgagactg aacagtctgataaaaagcaaataaatgaaaagagaaaaaagatgaaaagaaaaaggaataaggagtttgctgaaaagaat gattctggagaaggcattgctgaatctggtacaagttatacatgtgaaagtccaactaccaaaaacaacaaaagaaagca tattctacacgaaaacactgatctacatgaagaaaaaccttcaaagaagaagaagaaaaagaaaattaaggaattggaac tcggtgactgtataaaacattttgtaggcgattcagaaaagaaaaaggatccagaagaaagtaaaaatagtgatggacaa ttggcaaaggaaggttctgatgctgaaattaagacttctaaagtcaaaagcaataaagcaaaacgaaaagagaaaaagaa aaaaagaaggaggaagaaaatagcaaaggaagaagaagatgaagaggatgattctaaggaaggaacagcacaaactgccg cactggaatatctgaggttatgggcaaacaacaaaaaagagtggaaatttcaaaaagtccgccaagtttggctccttaac aatctattcagtaatgagaaggttcaagacaaagattttgctatccttttgtcatatctagaaggactgaaaggaaagtc aaggcaaacaactctccaaatggcagagaaaattatggaaccagtagatagtgattctgaagattcagaagaagttgtag atgcagtaaaacaggacagagcaaaacaaatcattcagatcctttcttaa |
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Protein
| Protein ID | pfu_aug1.0_2926.1_51836.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2926.1_51836.t1 MAGKGKLKHIHTPKYENMMDGVGSDYKEKKKKYDESSPKINTETVNVDKKHETEQSDKKQINEKRKKMKRKRNKEFAEKN DSGEGIAESGTSYTCESPTTKNNKRKHILHENTDLHEEKPSKKKKKKKIKELELGDCIKHFVGDSEKKKDPEESKNSDGQ LAKEGSDAEIKTSKVKSNKAKRKEKKKKRRRKKIAKEEEDEEDDSKEGTAQTAALEYLRLWANNKKEWKFQKVRQVWLLN NLFSNEKVQDKDFAILLSYLEGLKGKSRQTTLQMAEKIMEPVDSDSEDSEEVVDAVKQDRAKQIIQILS |
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