Gene
| Gene Model ID | pfu_aug1.0_2927.1_51837 |
|---|---|
| Locus | scaffold2927.1 : 3148 ... 9215 : - |
| To GenomeBrowser | scaffold2927.1:3148..9215 |
| Genes list of scaffold | scaffold2927.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2927.1_51837.t1 | 1 | 1 | HECT | 86 | 130 | 6.9e-09 | 35.2 | 2.2e-12 | 1.1e-08 | 34.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2927.1_51837.t1 | gi|307182643|gb|EFN69791.1| | hypothetical protein EAG_03885, partial [Camponotus floridanus] | 1.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2927.1_51837.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2927.1_51837.t1 atggtgatcgtttcaacgaccggctatttcatatcagtaatgggaccctacttggcaaggaataatgatgcttcaatcct taaccatattctggaaaccaacgtggaggacatacgagcatggatccaggaagatgacgtttttattgtggatcgtggtt tccgcgactcggcagaatatcttgaaaaattgggaattaaagcaaaaatgccagcctttatgaccagagcagggagaagg ggcgacgttagcctagaaaaaatattgaagtttgcgaccgggagccccgcaatcccgattctgggatattccatcagccc gacaatacagttccacgaggaacaaatatatccaacagcttcaacatgtatcaacaaactgcatttgccgttggatcaat tgtcgccagactcatttaacatgacctttatgaatgactattttggtttggaatag |
|
Protein
| Protein ID | pfu_aug1.0_2927.1_51837.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2927.1_51837.t1 MVIVSTTGYFISVMGPYLARNNDASILNHILETNVEDIRAWIQEDDVFIVDRGFRDSAEYLEKLGIKAKMPAFMTRAGRR GDVSLEKILKFATGSPAIPILGYSISPTIQFHEEQIYPTASTCINKLHLPLDQLSPDSFNMTFMNDYFGLE |
|