Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2927.1_51841
Locus scaffold2927.1 : 37346 ... 39105 : +
To GenomeBrowser scaffold2927.1:37346..39105
Genes list of scaffold scaffold2927.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_2927.1_51841.t1 1 1 AAA_30 6 64 4.5e-07 29.6 1.3e-09 5.0e-07 29.4
pfu_aug1.0_2927.1_51841.t1 1 1 PIF1 16 76 6.1e-12 45.1 1.7e-14 6.8e-12 45.0

Transcript
Transcript IDpfu_aug1.0_2927.1_51841.t1
Definition-
>pfu_aug1.0_2927.1_51841.t1
atgaaagtagaaatggacgactaccagaagaaagcccgcattgcctgcctgaacggccattatgttgttatctgtggaca
ggcgggcactgggaaatcgtatttgttgacaaaaatagttgatgagttaagaggatcagggaaatcggtgtccttaacat
catcgaccgggatatcagccactcaattaggtggaattactatcgacaaatgggcaggaataggagatggtagatatttg
aatgaagagatcctgcatttaatccgaaccgacgagagatataatttcaacttgagaaccgaaccataa

Protein
Protein IDpfu_aug1.0_2927.1_51841.t1
Definition-
>pfu_aug1.0_2927.1_51841.t1
MKVEMDDYQKKARIACLNGHYVVICGQAGTGKSYLLTKIVDELRGSGKSVSLTSSTGISATQLGGITIDKWAGIGDGRYL
NEEILHLIRTDERYNFNLRTEP

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