Gene
| Gene Model ID | pfu_aug1.0_2927.1_51844 |
|---|---|
| Locus | scaffold2927.1 : 68506 ... 72127 : + |
| To GenomeBrowser | scaffold2927.1:68506..72127 |
| Genes list of scaffold | scaffold2927.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2927.1_51844.t1 | 2 | 1 | zf-BED | 3 | 28 | 7.3e-06 | 25.6 | 3.5e-06 | 0.0032 | 17.1 |
| pfu_aug1.0_2927.1_51844.t1 | 2 | 1 | zf-C2H2_jaz | 6 | 29 | 3.0e-07 | 30.3 | 1.1e-07 | 0.0001 | 22.3 |
| pfu_aug1.0_2927.1_51844.t1 | 2 | 1 | zf-C2H2 | 7 | 28 | 1.9e-12 | 46.6 | 1.3e-09 | 1.2e-06 | 28.4 |
| pfu_aug1.0_2927.1_51844.t1 | 2 | 1 | zf-C2H2_4 | 7 | 28 | 2.5e-09 | 36.8 | 4.3e-08 | 4.0e-05 | 23.6 |
| pfu_aug1.0_2927.1_51844.t1 | 2 | 1 | zf-met | 7 | 29 | 8.0e-08 | 32.2 | 2.3e-07 | 0.00021 | 21.3 |
| pfu_aug1.0_2927.1_51844.t1 | 2 | 2 | zf-BED | 31 | 57 | 7.3e-06 | 25.6 | 5.1e-05 | 0.048 | 13.4 |
| pfu_aug1.0_2927.1_51844.t1 | 2 | 2 | zf-C2H2 | 33 | 56 | 1.9e-12 | 46.6 | 5.1e-08 | 4.7e-05 | 23.4 |
| pfu_aug1.0_2927.1_51844.t1 | 2 | 2 | zf-C2H2_4 | 33 | 56 | 2.5e-09 | 36.8 | 3.1e-06 | 0.0028 | 17.8 |
| pfu_aug1.0_2927.1_51844.t1 | 2 | 2 | zf-met | 33 | 53 | 8.0e-08 | 32.2 | 2.0e-05 | 0.019 | 15.1 |
| pfu_aug1.0_2927.1_51844.t1 | 2 | 2 | zf-C2H2_jaz | 35 | 52 | 3.0e-07 | 30.3 | 8.9e-05 | 0.082 | 13.0 |
Transcript
| Transcript ID | pfu_aug1.0_2927.1_51844.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2927.1_51844.t1 atggatgatgagaagaaattcaagtgtaacgaatgcaataaaagtttcaaaagacgttcggaattaaatagacaccttcg ttcaaaattacaaactttccaatgtcaacattgtcaaaagcagtttaataggaaagataacttaaaaactcacacaagaa ggttccacagacaggctgtgacttcatgtactataaatcagagtggtggtaatgctgctgtcgatgacgatgaaatccta tactcaagaaataatgatagagagattgaaacttctttggatggatctgctgttattgtaaaaatgcatccattggctac ggagcatttcgatttgttgttatttttcacaaatatatcggagaaagttttaaaccttcttacttcgtcaacacaagaaa ggagaggtatcagatggtatctgaatgcccgtgttgaatttcgacgcgaaagagatggtacaattgaaacgaccacgcca cattttcgaagtgtaacctacatacatttgcattcagaagagttcaatatacataatctacattaa |
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Protein
| Protein ID | pfu_aug1.0_2927.1_51844.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2927.1_51844.t1 MDDEKKFKCNECNKSFKRRSELNRHLRSKLQTFQCQHCQKQFNRKDNLKTHTRRFHRQAVTSCTINQSGGNAAVDDDEIL YSRNNDREIETSLDGSAVIVKMHPLATEHFDLLLFFTNISEKVLNLLTSSTQERRGIRWYLNARVEFRRERDGTIETTTP HFRSVTYIHLHSEEFNIHNLH |
|