Gene
| Gene Model ID | pfu_aug1.0_29290.1_55300 |
|---|---|
| Locus | scaffold29290.1 : 1 ... 12265 : - |
| To GenomeBrowser | scaffold29290.1:1..12265 |
| Genes list of scaffold | scaffold29290.1 |
| Synonym | pfu_aug2.0_2.1_06702 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_29290.1_55300.t1 | 8 | 1 | Ank_5 | 20 | 33 | 3.2e-29 | 100.2 | 0.4 | 990.0 | 0.2 |
| pfu_aug1.0_29290.1_55300.t1 | 5 | 1 | Ank_2 | 25 | 86 | 2.9e-33 | 114.0 | 1.8e-07 | 0.00045 | 20.4 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 1 | Ank | 25 | 41 | 2.9e-29 | 99.3 | 0.081 | 200.0 | 2.0 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 1 | Ank_3 | 25 | 39 | 1.6e-20 | 71.1 | 0.32 | 790.0 | 0.8 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 1 | Ank_4 | 26 | 66 | 1.6e-24 | 85.8 | 1.2e-05 | 0.03 | 14.8 |
| pfu_aug1.0_29290.1_55300.t1 | 5 | 2 | Ank_2 | 29 | 120 | 2.9e-33 | 114.0 | 2.9e-15 | 7.2e-12 | 45.4 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 2 | Ank_5 | 48 | 96 | 3.2e-29 | 100.2 | 2.4e-09 | 6.0e-06 | 26.3 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 2 | Ank | 55 | 87 | 2.9e-29 | 99.3 | 2.2e-08 | 5.5e-05 | 22.7 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 2 | Ank_3 | 55 | 83 | 1.6e-20 | 71.1 | 0.0012 | 3.0 | 8.3 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 2 | Ank_4 | 70 | 97 | 1.6e-24 | 85.8 | 6.0e-06 | 0.015 | 15.8 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 3 | Ank_5 | 80 | 127 | 3.2e-29 | 100.2 | 5.3e-09 | 1.3e-05 | 25.2 |
| pfu_aug1.0_29290.1_55300.t1 | 5 | 3 | Ank_2 | 84 | 132 | 2.9e-33 | 114.0 | 6.9e-09 | 1.7e-05 | 25.0 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 3 | Ank | 90 | 120 | 2.9e-29 | 99.3 | 1.7e-06 | 0.0043 | 16.8 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 3 | Ank_3 | 90 | 117 | 1.6e-20 | 71.1 | 2.3e-05 | 0.056 | 13.7 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 3 | Ank_4 | 91 | 129 | 1.6e-24 | 85.8 | 3.7e-09 | 9.1e-06 | 26.0 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 4 | Ank_3 | 122 | 132 | 1.6e-20 | 71.1 | 0.54 | 1300.0 | 0.1 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 4 | Ank | 145 | 159 | 2.9e-29 | 99.3 | 0.035 | 85.0 | 3.2 |
| pfu_aug1.0_29290.1_55300.t1 | 5 | 4 | Ank_2 | 146 | 175 | 2.9e-33 | 114.0 | 5.3e-05 | 0.13 | 12.6 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 4 | Ank_4 | 146 | 179 | 1.6e-24 | 85.8 | 0.017 | 43.0 | 4.7 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 4 | Ank_5 | 148 | 186 | 3.2e-29 | 100.2 | 1.6e-05 | 0.04 | 14.1 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 5 | Ank_3 | 161 | 190 | 1.6e-20 | 71.1 | 0.0026 | 6.3 | 7.3 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 5 | Ank | 166 | 190 | 2.9e-29 | 99.3 | 0.045 | 110.0 | 2.8 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 5 | Ank_4 | 228 | 244 | 1.6e-24 | 85.8 | 0.047 | 120.0 | 3.4 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 5 | Ank_5 | 229 | 245 | 3.2e-29 | 100.2 | 0.066 | 160.0 | 2.7 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 6 | Ank_3 | 239 | 267 | 1.6e-20 | 71.1 | 0.011 | 27.0 | 5.3 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 6 | Ank | 241 | 269 | 2.9e-29 | 99.3 | 0.021 | 52.0 | 3.9 |
| pfu_aug1.0_29290.1_55300.t1 | 5 | 5 | Ank_2 | 258 | 406 | 2.9e-33 | 114.0 | 3.3e-12 | 8.1e-09 | 35.7 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 6 | Ank_4 | 260 | 281 | 1.6e-24 | 85.8 | 0.18 | 460.0 | 1.5 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 6 | Ank_5 | 261 | 318 | 3.2e-29 | 100.2 | 0.00015 | 0.38 | 11.0 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 7 | Ank_3 | 275 | 288 | 1.6e-20 | 71.1 | 0.23 | 570.0 | 1.3 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 8 | Ank_3 | 321 | 335 | 1.6e-20 | 71.1 | 0.24 | 600.0 | 1.2 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 7 | Ank | 322 | 373 | 2.9e-29 | 99.3 | 0.00035 | 0.88 | 9.5 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 7 | Ank_5 | 322 | 345 | 3.2e-29 | 100.2 | 0.51 | 1300.0 | -0.2 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 7 | Ank_4 | 323 | 362 | 1.6e-24 | 85.8 | 0.16 | 410.0 | 1.6 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 9 | Ank_3 | 347 | 370 | 1.6e-20 | 71.1 | 0.013 | 31.0 | 5.2 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 8 | Ank_4 | 352 | 389 | 1.6e-24 | 85.8 | 3.6e-09 | 9.0e-06 | 26.0 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 8 | Ank_5 | 361 | 416 | 3.2e-29 | 100.2 | 1.7e-09 | 4.3e-06 | 26.8 |
| pfu_aug1.0_29290.1_55300.t1 | 8 | 8 | Ank | 375 | 406 | 2.9e-29 | 99.3 | 1.4e-08 | 3.5e-05 | 23.3 |
| pfu_aug1.0_29290.1_55300.t1 | 10 | 10 | Ank_3 | 375 | 401 | 1.6e-20 | 71.1 | 2.6e-05 | 0.063 | 13.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_29290.1_55300.t1 | gi|123475671|ref|XP_001321012.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 3.0e-25 |
Transcript
| Transcript ID | pfu_aug1.0_29290.1_55300.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29290.1_55300.t1 atggctgaaaactttatgtttcaggtaatggcatcatatgaagacatcgttgaagaattatatcaaccaactggtaatgg accacttcatcgcgctgtcctattgaaagatgaacagaccgcgaaaaagtatggacatctcatcaatgacgtcaatttca aaggagaaactcctctgcatctcgccgtgaaacgaaatgaggaaaaccctgtcaagcgaatcttaatggagttcagacca aacgtgaatgccagaaacaagtggcaccaaacacctctccattatgcagtcaacagtggcaaaaatgaaaatctaaatgt ccttctaaatacagaagggattgacatagatgcaaaggacctaaatggctatactcctttgttgtgcttggtagatgctc atgaagaagcttcaccagactgggcatcagggttccgaagtctcttggaagcaggggcgaacagaaacagcaaaacgacg tatggatacggtatcttacacttagctgctgccaagaggaacaatactaattttctgtccactatactggatttaatacc tgatgttgaccttctaagtcttacaacgatagatgagaatttcttacacatttacatgttccagttcgcagaagtatatg aaatagcccaagaattcattgagaaatcgctgaagaaggaggacgcccgtgcattactaaaccaacgtgacgcttttgga aataccccattctcactggtcatggaagacagaaatttcgacagcaacttcatatcaacactactgagcttcggtgcgga cgcaactaccacagacttcctaggtaatacaattctacatcgacttgtgtgctctgcagcatcgcctattatccctgaaa taacttgcctagttcgcgcaggcgcaccgacaaagaaaacaaacttctttggccaatcccctgctgccttagcatacgaa atggatgttattgaattcttcattcgtgaacatgtggattttaatcaaacagatgcatggaaacgttcggctttcacaac catcgcagatcagaaacctcgaccagaagtaataaagacgttgatcagcaaaggaggtgcagatgtacatataagagaca gatatggatcgactcctctccatctagctgcttacaacgattttgattatcaagtagatatattactcagtcatggagcc gacaaaggcgcaaaagatgaaatgaatgatttaccatgggaaactgcagatcgtcatctttgtctcaactcatacaggag actccgccaagaagagaatgaatctgtcctctatagaagagttaacacggtggatatcctggggcagcgtagaagcagtg ttacggcatcagagattcaaaaagttggcttcagtcatatatctattggtttcccagaagacccacgtagtttttatgag aatatgttgaagcaatcattgatagaacctagaagcgaagaagagcgcatcgtgtcgacagtgcggaaatttgtgggaaa tgtgtgcgatcttgttggtgagtatgactcgcgtttcaaagtaaaactgataccgacaggaagtactgctgagggaacaa aagtagggaaactagatgaattcgatttctttcttggaatggaagagttgctaaacagctttgacattatcaaaacacca ggagtacaaagaacaccatacgcttgtttgaaaatgaaacctgatgtttgtggagacttgtttgcacaatttacaacttc tgaagggttctttgtcgcctatcagtttctccaacatctctacaaatacataaagaaagcgctaggatcaagtaaaccct ggaaaaacaccgacttatccaacagatgtgaaaataaaatccatgttattgatgggaagccagttttcaatgtcgttatt tattggacaggatctaagttcaaacacattaagataagcatagatctagtaccaggtgtatatatgccgggatggtggcc atcagacatattgtgtgcgaaaattggactttttagtcaaaacgtgcgagatgctggatgttttctgattttccagtctc acgaaaacgactttcataacttcaggttcctcgaggaaagtttgttgaaacttggatttccggatgacaaagatggaata caagtgattataccctgtgactga |
|
Protein
| Protein ID | pfu_aug1.0_29290.1_55300.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29290.1_55300.t1 MAENFMFQVMASYEDIVEELYQPTGNGPLHRAVLLKDEQTAKKYGHLINDVNFKGETPLHLAVKRNEENPVKRILMEFRP NVNARNKWHQTPLHYAVNSGKNENLNVLLNTEGIDIDAKDLNGYTPLLCLVDAHEEASPDWASGFRSLLEAGANRNSKTT YGYGILHLAAAKRNNTNFLSTILDLIPDVDLLSLTTIDENFLHIYMFQFAEVYEIAQEFIEKSLKKEDARALLNQRDAFG NTPFSLVMEDRNFDSNFISTLLSFGADATTTDFLGNTILHRLVCSAASPIIPEITCLVRAGAPTKKTNFFGQSPAALAYE MDVIEFFIREHVDFNQTDAWKRSAFTTIADQKPRPEVIKTLISKGGADVHIRDRYGSTPLHLAAYNDFDYQVDILLSHGA DKGAKDEMNDLPWETADRHLCLNSYRRLRQEENESVLYRRVNTVDILGQRRSSVTASEIQKVGFSHISIGFPEDPRSFYE NMLKQSLIEPRSEEERIVSTVRKFVGNVCDLVGEYDSRFKVKLIPTGSTAEGTKVGKLDEFDFFLGMEELLNSFDIIKTP GVQRTPYACLKMKPDVCGDLFAQFTTSEGFFVAYQFLQHLYKYIKKALGSSKPWKNTDLSNRCENKIHVIDGKPVFNVVI YWTGSKFKHIKISIDLVPGVYMPGWWPSDILCAKIGLFSQNVRDAGCFLIFQSHENDFHNFRFLEESLLKLGFPDDKDGI QVIIPCD |
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