Gene
| Gene Model ID | pfu_aug1.0_2932.1_44525 |
|---|---|
| Locus | scaffold2932.1 : 1 ... 8895 : - |
| To GenomeBrowser | scaffold2932.1:1..8895 |
| Genes list of scaffold | scaffold2932.1 |
| Synonym | pfu_aug2.0_895.1_17912 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2932.1_44525.t1 | 2 | 1 | ANF_receptor | 6 | 45 | 8.7e-06 | 24.7 | 0.0079 | 29.0 | 3.2 |
| pfu_aug1.0_2932.1_44525.t1 | 2 | 2 | ANF_receptor | 62 | 112 | 8.7e-06 | 24.7 | 9.4e-08 | 0.00035 | 19.4 |
| pfu_aug1.0_2932.1_44525.t1 | 2 | 1 | Lig_chan | 68 | 116 | 8.2e-16 | 58.0 | 0.16 | 600.0 | 0.0 |
| pfu_aug1.0_2932.1_44525.t1 | 1 | 1 | SBP_bac_3 | 147 | 257 | 6.0e-15 | 55.1 | 2.9e-18 | 1.1e-14 | 54.2 |
| pfu_aug1.0_2932.1_44525.t1 | 1 | 1 | Lig_chan-Glu_bd | 156 | 217 | 6.8e-08 | 32.3 | 3.4e-11 | 1.3e-07 | 31.5 |
| pfu_aug1.0_2932.1_44525.t1 | 2 | 2 | Lig_chan | 272 | 339 | 8.2e-16 | 58.0 | 1.1e-18 | 4.2e-15 | 55.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2932.1_44525.t1 | gi|325297076|ref|NP_001191543.1| | glutamate receptor subunit protein GluR7 precursor [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_2932.1_44525.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2932.1_44525.t1 atgaaagtgacggtgcgaaaactggataggaatccagacaattttataaagatgtttaaggatataaaactaaagaatga aaacagattcattatagactgtcatgtcagtaaggtcggaacagttttacataagaagtcgacatactttcctaagaatg acaccgatgtgtttccgacggagaatgcgatgatgtatgatgctgtgatggtattcgatcaggcattagagaggttgctc aaggcccacaatatggactttgacaaaaagctgagctgtaacggtacagagacgtggagcgaagggtcaagtctgttaaa ctacatgaagacgtccggcgtctggtattctacccaaccggaaggaaagcgcattaatataacaaaatcacaagtcgaaa gaaaagatgacaatctgagtaagattaaaggcaaaagactgaaagttatcactaaaacggatgcgccttatgtatttgat gacaaggagacttatccggatgggaggataagatacacagggtttgcttttaacatttttgaccttatcgccaaaagact gaatttttcttacgacgtcgtaggaagtacaacgtcttatggaaattgtaatgatcagggggtatgtgacggaatgatgg actatctctataataagtcagttgatgtagccgttgccggaatgactattacctatgaaagagagaaatttgtggacttc accaaaccattcctgaatctcggtataaccattctgtacaggaaaccaaaaccagaaccaccagctttgttctcatttct gaaccctctccacctagacgtctggatctacatgatagcggggattctatgtgtcagcttcatgttgtttgtcatagctc gattcactccttatgaatggtgtaatccccatccttgtgatcccaataccgacgtggtggaaaatcagttctccatcctc aacagtttatggttcacggttggagctcttatgcagcaagctcacctcgacgaagtagaggggggcttatgctatcgccc cgtcgtcggcgtcggcgtccgcactataggttaa |
|
Protein
| Protein ID | pfu_aug1.0_2932.1_44525.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2932.1_44525.t1 MKVTVRKLDRNPDNFIKMFKDIKLKNENRFIIDCHVSKVGTVLHKKSTYFPKNDTDVFPTENAMMYDAVMVFDQALERLL KAHNMDFDKKLSCNGTETWSEGSSLLNYMKTSGVWYSTQPEGKRINITKSQVERKDDNLSKIKGKRLKVITKTDAPYVFD DKETYPDGRIRYTGFAFNIFDLIAKRLNFSYDVVGSTTSYGNCNDQGVCDGMMDYLYNKSVDVAVAGMTITYEREKFVDF TKPFLNLGITILYRKPKPEPPALFSFLNPLHLDVWIYMIAGILCVSFMLFVIARFTPYEWCNPHPCDPNTDVVENQFSIL NSLWFTVGALMQQAHLDEVEGGLCYRPVVGVGVRTIG |
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