Gene
| Gene Model ID | pfu_aug1.0_2938.1_08494 |
|---|---|
| Locus | scaffold2938.1 : 1 ... 2755 : - |
| To GenomeBrowser | scaffold2938.1:1..2755 |
| Genes list of scaffold | scaffold2938.1 |
| Synonym | pfu_aug2.0_48.1_26741 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2938.1_08494.t1 | 1 | 1 | Tetraspannin | 3 | 143 | 5.1e-16 | 58.6 | 4.6e-20 | 6.9e-16 | 58.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2938.1_08494.t1 | gi|115709908|ref|XP_783664.2| | 2.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_2938.1_08494.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2938.1_08494.t1 atgaccaagtataagtcacatgcgttcaccaaaacgcagctggatgaattacaaatagagtatagttgttgtggcagcca gacatacacagattggttcaatatacaatggatccatgacgaatatctctcaaatccaattaaagctgttgccaaaaaaa actctgccaagggtgaatacaccaatgatgatgtccccttcagctgttgtgcatacacttcaatgagaccctgtatacac catgacgtacatgacaacaagaagcactttagttatgactacagaaccggtgtcactctacataccaggggctgtaaaga tgcactcacagatctgtacgggaggaagattttagctgaagttggagcaacagtttttgtcatatctgtcgttgagctgg ctttggtcatcattatccgcatcctgcagacggcaattgacagttctgtggaagcagacgacccagatgaaccgtctgta gcatatatattccctttcggacgaactgcaatgaaatcggtggcaaaaggcataaagaaataccacaaaggtaaaggtga tgacaaggcaacaacattaccattactagatgcacatggtcatgaaattgtagaagacgacgaccaaggcacagattcct tctttgatgattccacatttgatacagtatcacaagacagtgcggaagctaaccttgctaatgttgatgaacacatctat gaagagataacacagccattagacgatcactatgttggcgagataacagaaccacta |
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Protein
| Protein ID | pfu_aug1.0_2938.1_08494.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2938.1_08494.t1 MTKYKSHAFTKTQLDELQIEYSCCGSQTYTDWFNIQWIHDEYLSNPIKAVAKKNSAKGEYTNDDVPFSCCAYTSMRPCIH HDVHDNKKHFSYDYRTGVTLHTRGCKDALTDLYGRKILAEVGATVFVISVVELALVIIIRILQTAIDSSVEADDPDEPSV AYIFPFGRTAMKSVAKGIKKYHKGKGDDKATTLPLLDAHGHEIVEDDDQGTDSFFDDSTFDTVSQDSAEANLANVDEHIY EEITQPLDDHYVGEITEPL |
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