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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2954.1_44535
Locus scaffold2954.1 : 4946 ... 16205 : -
To GenomeBrowser scaffold2954.1:4946..16205
Genes list of scaffold scaffold2954.1
Synonym pfu_aug2.0_1398.1_28259

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2954.1_44535.t1 gi|291241226|ref|XP_002740511.1| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
egg-Dshape 1
>Adult tissues
maleGonad 1
mantle 1

Transcript
Transcript IDpfu_aug1.0_2954.1_44535.t1
Definition-
>pfu_aug1.0_2954.1_44535.t1
atgttgagaagaaaagtagaaacgacagacaggacagctgaaaaaatttcatcaaaagcaaaaataagacggaagaaaag
atcttctgacgatttccgtccacttggggagaagagatcacaccaagatgacgaagaaaagaaactcgaatctcttgtat
tgggaggagcagatgatgtgatagaagtattggaaaatcagaccttgaacgttgatggaaaaaacaatcccaaaatccag
agtgttttcatagaaaattttcccatacatacagctcatttcagtgccaatggagaggaggttgtcatggggtccaaaca
taaaagtttctactacttcgatatgatggcaggaaaaatgattaatgtcccttggattaaaggtatagaagaaacaaaca
tgaagagatttaaagtatcaccagacggtagattcctagtgttcctagggagatatggtgcaatgcatctcatttctgct
cagtcaaaagagtggatagatacgttacgtatgaacggcaacgtacaagccgtggcattctccagggatggcagtaagat
gtactcacatggagatgatggagaggtttttgtatgggatatgaatactcggcagtgtatacatcatttctacgatgagg
gttgtatacagggtaccgcgatagcggcttcaccaaacaaccaatttctggcctgtgggtaa

Protein
Protein IDpfu_aug1.0_2954.1_44535.t1
Definition-
>pfu_aug1.0_2954.1_44535.t1
MLRRKVETTDRTAEKISSKAKIRRKKRSSDDFRPLGEKRSHQDDEEKKLESLVLGGADDVIEVLENQTLNVDGKNNPKIQ
SVFIENFPIHTAHFSANGEEVVMGSKHKSFYYFDMMAGKMINVPWIKGIEETNMKRFKVSPDGRFLVFLGRYGAMHLISA
QSKEWIDTLRMNGNVQAVAFSRDGSKMYSHGDDGEVFVWDMNTRQCIHHFYDEGCIQGTAIAASPNNQFLACG

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