Gene
| Gene Model ID | pfu_aug1.0_2954.1_44536 |
|---|---|
| Locus | scaffold2954.1 : 18299 ... 34045 : - |
| To GenomeBrowser | scaffold2954.1:18299..34045 |
| Genes list of scaffold | scaffold2954.1 |
| Synonym | pfu_aug2.0_1398.1_28260 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2954.1_44536.t1 | 1 | 1 | GatB_N | 21 | 307 | 0.0 | 350.7 | 0.0 | 0.0 | 350.3 |
| pfu_aug1.0_2954.1_44536.t1 | 1 | 1 | GatB_Yqey | 411 | 496 | 7.8e-13 | 48.3 | 4.6e-16 | 3.4e-12 | 46.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2954.1_44536.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2954.1_44536.t1 atgattccttcatcaaggtttccgtataaatatcggaaagagaaaagaggcaaatggaaaccagtaattggactcgagat acatgcacagatcaagactgatagtaaattattctcccgatcagggacatcgttcagtacacctgttaattgccaagtct cattttttgacgcagccctccctggcacattaccggtactgaacaggtcttgtgtagaggctggagtcaggacagcttta gctttgaagagtaacatcaacaaagtgtccaaatttgacaggaaacactacttttatgccgatcttccacaaggctatca gataacacaacagagaatgccacttgctgtcggaggaaaagtggactacgcaatcgttgatgaaagtacgcagaaagaga ttgggcaagggacggcaagaatcacacaaatacagctggagcaagatagcggcaaaagtcttcatgacgaagaagaaaaa cggagcttgatagatctcaacagagctggaataggacttatggaaattgttacagagccagacttttccaatggacaaga ggcgcactcatttgtgtcagaattacgactcatcttgaggtcccttgggacatgctcaggaaagatgaaagagggagcat tgagggtagatgccaatatatccgtacaccaagagggggagccacttggaacaagaacagaagtcaagaacatcggcaat atcaaggccattaaagcggcagtagattacgagatacaacgacagatagctatattggaggaaggcggtacaatagaaaa cgaaaccaggagctatgatggattgacagggacaacgttacccatgcgtgacaaggaattaaagatggactatagattta tgccggagcctaatttaccgcctgtgcgactttatgactcggaaaccattagtaaagtggcagacccttccagtgttata gatattgataaatttagaagctccattccacccttaccgaaacaagtgaaagaaaacttgcagaaagaatacaaaatttc gctgtttcaagctaatatgctatttggcatcgtgggattgtacgatcttttccaagacatactagagcagccaaacaaga atctgtatagagttttaaatttccttcttcatgacctacatggagcatataaaaccagaaacatgtcattcgaagatgga tgtttggttaaattcatatacatgtacatgcaaattttagttgaatatatagatgggaatgaaagaatatcaccacgtat aatagcagaaaagaaaaacctaaccatgattaatgatacagaaattctaactgaagcttgtaaaaaatcgatggataaaa atccagcattggtaaaaacatacagtaaaggcaaagttggtgctataaaagccttgataggggacgccatggaattcact gataatcgtgctagtaggattgtcattacggaaataatggaatctttgctaccccaagtggaaaagaaaaaacggaaaga aaaaaagttaaaagattga |
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Protein
| Protein ID | pfu_aug1.0_2954.1_44536.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2954.1_44536.t1 MIPSSRFPYKYRKEKRGKWKPVIGLEIHAQIKTDSKLFSRSGTSFSTPVNCQVSFFDAALPGTLPVLNRSCVEAGVRTAL ALKSNINKVSKFDRKHYFYADLPQGYQITQQRMPLAVGGKVDYAIVDESTQKEIGQGTARITQIQLEQDSGKSLHDEEEK RSLIDLNRAGIGLMEIVTEPDFSNGQEAHSFVSELRLILRSLGTCSGKMKEGALRVDANISVHQEGEPLGTRTEVKNIGN IKAIKAAVDYEIQRQIAILEEGGTIENETRSYDGLTGTTLPMRDKELKMDYRFMPEPNLPPVRLYDSETISKVADPSSVI DIDKFRSSIPPLPKQVKENLQKEYKISLFQANMLFGIVGLYDLFQDILEQPNKNLYRVLNFLLHDLHGAYKTRNMSFEDG CLVKFIYMYMQILVEYIDGNERISPRIIAEKKNLTMINDTEILTEACKKSMDKNPALVKTYSKGKVGAIKALIGDAMEFT DNRASRIVITEIMESLLPQVEKKKRKEKKLKD |
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