Gene
| Gene Model ID | pfu_aug1.0_29602.1_11975 |
|---|---|
| Locus | scaffold29602.1 : 13 ... 7261 : + |
| To GenomeBrowser | scaffold29602.1:13..7261 |
| Genes list of scaffold | scaffold29602.1 |
| Synonym | pfu_aug2.0_310.1_00591 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_29602.1_11975.t1 | 1 | 1 | Ribosomal_S9 | 46 | 127 | 6.7e-19 | 68.3 | 1.1e-22 | 8.5e-19 | 67.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_29602.1_11975.t1 | gi|350535082|ref|NP_001232984.1| | uncharacterized protein LOC100165190 [Acyrthosiphon pisum] | 4.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_29602.1_11975.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29602.1_11975.t1 atgataggattgagtcgagagacaaacatatcagtgacttcttgcatcacagcggatcgcacagcagcaacaatgcggga aatatccccgtctgggaggaagcatccctctgaagtcgtcataaaaagaaaagcacagaaaaagacttcctttgctgaag tgagagtgtatgaaaagggtagcggagtattagatataaacggtgaaggaatcgactactttgatcagcttgttcatagg aaggctatattatttcctttgtcatttacggacttgataaaagatgttgatatccatgtgaccacatggggaggagggcc gagtgggcaggccatggctatacgatttgccctcgctaaggccctcaaggctcatacaacggcggaagtcatcgaaagaa tgaaatatg |
|
Protein
| Protein ID | pfu_aug1.0_29602.1_11975.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_29602.1_11975.t1 MIGLSRETNISVTSCITADRTAATMREISPSGRKHPSEVVIKRKAQKKTSFAEVRVYEKGSGVLDINGEGIDYFDQLVHR KAILFPLSFTDLIKDVDIHVTTWGGGPSGQAMAIRFALAKALKAHTTAEVIERMKY |
|