Gene
| Gene Model ID | pfu_aug1.0_2963.1_59074 |
|---|---|
| Locus | scaffold2963.1 : 6 ... 5785 : - |
| To GenomeBrowser | scaffold2963.1:6..5785 |
| Genes list of scaffold | scaffold2963.1 |
| Synonym | pfu_aug2.0_4.1_13339 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2963.1_59074.t1 | 13 | 1 | zf-H2C2_5 | 197 | 214 | 4.3e-06 | 26.6 | 0.00033 | 2.4 | 8.5 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 2 | zf-H2C2_5 | 219 | 242 | 4.3e-06 | 26.6 | 0.00025 | 1.8 | 8.9 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 3 | zf-H2C2_5 | 253 | 260 | 4.3e-06 | 26.6 | 0.56 | 4200.0 | -1.7 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 4 | zf-H2C2_5 | 382 | 404 | 4.3e-06 | 26.6 | 6.7e-05 | 0.5 | 10.7 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 5 | zf-H2C2_5 | 499 | 522 | 4.3e-06 | 26.6 | 1.2e-06 | 0.0092 | 16.1 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 6 | zf-H2C2_5 | 550 | 558 | 4.3e-06 | 26.6 | 0.28 | 2100.0 | -0.7 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 7 | zf-H2C2_5 | 617 | 640 | 4.3e-06 | 26.6 | 3.7e-06 | 0.028 | 14.6 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 8 | zf-H2C2_5 | 662 | 685 | 4.3e-06 | 26.6 | 6.2e-05 | 0.46 | 10.8 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 9 | zf-H2C2_5 | 807 | 831 | 4.3e-06 | 26.6 | 0.015 | 110.0 | 3.3 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 10 | zf-H2C2_5 | 863 | 877 | 4.3e-06 | 26.6 | 0.63 | 4600.0 | -1.8 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 11 | zf-H2C2_5 | 925 | 949 | 4.3e-06 | 26.6 | 0.32 | 2400.0 | -0.9 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 12 | zf-H2C2_5 | 972 | 996 | 4.3e-06 | 26.6 | 0.014 | 100.0 | 3.4 |
| pfu_aug1.0_2963.1_59074.t1 | 13 | 13 | zf-H2C2_5 | 1001 | 1022 | 4.3e-06 | 26.6 | 5.6e-05 | 0.41 | 10.9 |
Transcript
| Transcript ID | pfu_aug1.0_2963.1_59074.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2963.1_59074.t1 atgtcaaaccttcgtatagagagtgtgtccagcctgagccaagacgaggtacaggtcaagacagaaccagaggatcctgg gtatgatgaggcttacagccagagtccggtatctacagtatctaccgtgtctgccgacaccaatggtcattctacaccac aaaacaaccaaaacatacggtccatactcaacaatatgctggatcagaacaaggagcttaccgtaaagtcagttatagac gacctgctacagagaaataacacgttactggagcaagtcgatgccagcatctacaaacctcaacccagaaacacgtcaag taagaaatatgatgacatcatcagaaataagtatggggataatacagtgaggagtaacattctacgtcctggtagtccca ccaaggcctgtaccatacccaagagggatctacctcagatgacaaacagtgtgatagtattaaatgctttggagacatgc tctggggagagtaatattcctaaagagtatgtatgtggagtgtcatctaaagcttatgtcatgacaagtgagggcgtcaa catgcagtctgaccttcagttctattggtgcaacttttgtacgtttaagacagagtcgaaggaagtactcgttcagcatg tgatagagcataggttccactgtaaatactgttcctaccagtccttctcacgtgctgatgttataagacactctaaccaa gatcatgatgaattcaaagacgtggcaaggtcactcaagttctgcacattcacctcagattacaatgatgctgaaagcaa gaaaaggaagctagaagctgaagccaaaaaacaacctccgccaaagaaattcaaaagtgctgctcagaaagaaaaggaaa aagcagaaaagaagaagagatctgaaaatgccaagaaaaattcttcaaaaataatgatgaagaagatcctcattccacgg cagactggctcggtaaaaccagtggctcagccggtagagcagagtttgcccacagtgacgtacaatccacctggtgccaa caagacaacggagcagggaaagcagactgctgggaatgtgacgtctacatctacgacaaagtctggtagtactgtgactg tctcatctggtctgtgctggaactgtggttactgtgactttgttacacttagtcaaacattcctcaaaactcacctcaat accaggcatacaggcaaagctcacaagtatgtagccatgttggtgtcttctcaggatgaaatgaacaagatcaaggagcg agatgctatggtgtattccactcctagtaccgtagtggttgggggtcctaaccgtgcttcggtacaaactcctcctaccc caacacctcctgctcctaaggagaacaaggagcagaagccagagagcccaaaacctgataacacctcacaggcggaggaa tcagatgatgaggagtacattcccgaagaagagaaaaagaagtatcctctcacttataaatgtgctcattgtaacttcaa tgctcctgtctgttttaagatcaaggaacatttactgatgaagcacttaggatgtgttttgtatgctttagatatgcggg ccataaaactgaagcaaaggagatacgtattcttctgtcataggaagaactgttcctttacaaccaaaaagacagatgaa tatcttagccatagtgacagctgtactccatggcttgtggagaactgtccagaacaggttgatcctcagaccaggaaatg tctggaaatgactcgctccttctcctccaagatctcacagaaagctttccagatggcaaagaacttcaagtcaaataagg tagctgaatatgcctgtctgtattgtagctattctaccaataacaacaccaggctgaagaagcatgtactgtccaaccac agggagtttgctacagttatgaaagatattcatgcacattctatgggtaaaaagacgatggtatatttctgtaagcattg cctatgggaatcacggcaggaaactgaattagaggaacatttgcattcaaaacatgatgattttacgtatgttaactcaa acataggagaaacaaccgcacagaagaataggagccaagagcccaagaagcacaatgagacaatcagtgcgcatcctcca agtagtacggaggtgagaagacgatctggctcaccacaatgggaatctggaaactctgataatgtggaggaaaatgaaga agaggaggaggaaatacaaccagaagatctggaggtgagtgaggaagaggtacagaggatgatggatgaatatgtcaagg acgaggcctcacacggaaggtctcctggtcgacctatgaggaaggcctcagccgaggcatctgtcagggtcagagctcaa ggtcaccagccacccatgtacaggtgtatgcactgttatcacatgtgctttggagtgaacctaatgaggaaacacatctt taccaggcatcccaaggaacctctgagagctatagatgtcaagaagatgatgggtcgtcagtttgcttactactgcttct gtcctaaggcactctgtaaaacggtgaatagctccgagcaggcattgattaaccatgccatgcaggaacatggattgtct gatgagaatgaccatctgaaggctctactgatgccgttctctccacataccagcacaccggcaccaccacctgttgaacg tgtcaaaacagaggagccagagaacatggagtatgaacctagcaccgttggttatgaatgcttgttttgtagcacgtcta caagtgacacagttcatggaatgaaggtacatgtaaaggaatatcaccccagtgaggaaatcatcttcagagactgtgct gccagaaaactgaagaagtcgtcaagaatcttcatgtgtgaggtggacaattgtgacatattttattctgagcagaagga atttgagcttcataagctggctcatcagaatgcacacatatacgagtgtaccgtctgtcagtggtttactgctacaccag actccatctccgatcacatgctggcgcttcataaagggggagccgccacaatcgagatccagcttcttcttgacagtgat ggacaggtcatcaagcgggtcagtggcaccaaaatcaaacaggaaccgctataa |
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Protein
| Protein ID | pfu_aug1.0_2963.1_59074.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2963.1_59074.t1 MSNLRIESVSSLSQDEVQVKTEPEDPGYDEAYSQSPVSTVSTVSADTNGHSTPQNNQNIRSILNNMLDQNKELTVKSVID DLLQRNNTLLEQVDASIYKPQPRNTSSKKYDDIIRNKYGDNTVRSNILRPGSPTKACTIPKRDLPQMTNSVIVLNALETC SGESNIPKEYVCGVSSKAYVMTSEGVNMQSDLQFYWCNFCTFKTESKEVLVQHVIEHRFHCKYCSYQSFSRADVIRHSNQ DHDEFKDVARSLKFCTFTSDYNDAESKKRKLEAEAKKQPPPKKFKSAAQKEKEKAEKKKRSENAKKNSSKIMMKKILIPR QTGSVKPVAQPVEQSLPTVTYNPPGANKTTEQGKQTAGNVTSTSTTKSGSTVTVSSGLCWNCGYCDFVTLSQTFLKTHLN TRHTGKAHKYVAMLVSSQDEMNKIKERDAMVYSTPSTVVVGGPNRASVQTPPTPTPPAPKENKEQKPESPKPDNTSQAEE SDDEEYIPEEEKKKYPLTYKCAHCNFNAPVCFKIKEHLLMKHLGCVLYALDMRAIKLKQRRYVFFCHRKNCSFTTKKTDE YLSHSDSCTPWLVENCPEQVDPQTRKCLEMTRSFSSKISQKAFQMAKNFKSNKVAEYACLYCSYSTNNNTRLKKHVLSNH REFATVMKDIHAHSMGKKTMVYFCKHCLWESRQETELEEHLHSKHDDFTYVNSNIGETTAQKNRSQEPKKHNETISAHPP SSTEVRRRSGSPQWESGNSDNVEENEEEEEEIQPEDLEVSEEEVQRMMDEYVKDEASHGRSPGRPMRKASAEASVRVRAQ GHQPPMYRCMHCYHMCFGVNLMRKHIFTRHPKEPLRAIDVKKMMGRQFAYYCFCPKALCKTVNSSEQALINHAMQEHGLS DENDHLKALLMPFSPHTSTPAPPPVERVKTEEPENMEYEPSTVGYECLFCSTSTSDTVHGMKVHVKEYHPSEEIIFRDCA ARKLKKSSRIFMCEVDNCDIFYSEQKEFELHKLAHQNAHIYECTVCQWFTATPDSISDHMLALHKGGAATIEIQLLLDSD GQVIKRVSGTKIKQEPL |
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