Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_2963.1_59075
Locus scaffold2963.1 : 8926 ... 14911 : +
To GenomeBrowser scaffold2963.1:8926..14911
Genes list of scaffold scaffold2963.1
Synonym pfu_aug2.0_4.1_13338

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_2963.1_59075.t1 gi|291224059|ref|XP_002732024.1| PREDICTED: SOSS complex subunit C-like [Saccoglossus kowalevskii] 4.0e-17

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
trochophore 1
>Adult tissues
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_2963.1_59075.t1
Definition-
>pfu_aug1.0_2963.1_59075.t1
atggaggagaaccgtaacaggaagatcctagaacagctcgaggagcagaaacgccgtcttagaggtggacatggcagtgg
cggatccagtattcccagtggatccatgagttcagtacctatgccacaacaacacatgggtagtgttccaatggacgctc
cacacatgaccccggcacagagggcagcactacaacatgctaacgctaattccgtgggatacttcataactcaggattct
tctttcgggaatttgattcttcctgttttacccagatttagcgagaaatga

Protein
Protein IDpfu_aug1.0_2963.1_59075.t1
Definition-
>pfu_aug1.0_2963.1_59075.t1
MEENRNRKILEQLEEQKRRLRGGHGSGGSSIPSGSMSSVPMPQQHMGSVPMDAPHMTPAQRAALQHANANSVGYFITQDS
SFGNLILPVLPRFSEK

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