Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_29632.1_55311
Locus scaffold29632.1 : 482 ... 7105 : -
To GenomeBrowser scaffold29632.1:482..7105
Genes list of scaffold scaffold29632.1
Synonym pfu_aug2.0_469.1_30800

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_29632.1_55311.t1 1 1 DERM 3 49 1.6e-12 47.6 2.2e-16 1.6e-12 47.6

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 3

Transcript
Transcript IDpfu_aug1.0_29632.1_55311.t1
Definition-
>pfu_aug1.0_29632.1_55311.t1
atgtcatgtgaccaaggctatgtgaacacgtgggacaaaacaatcaatttctactgctcaaataatggctacatcaatgg
atttcacagtgtccaccataattattatgaggatcgcagaatgagcttccgatgttgttatctcccagagatcgtatttg
gggatttactaactgctactatcaaagatgtaacttttagaccatga

Protein
Protein IDpfu_aug1.0_29632.1_55311.t1
Definition-
>pfu_aug1.0_29632.1_55311.t1
MSCDQGYVNTWDKTINFYCSNNGYINGFHSVHHNYYEDRRMSFRCCYLPEIVFGDLLTATIKDVTFRP

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495