Gene
| Gene Model ID | pfu_aug1.0_2966.1_30302 |
|---|---|
| Locus | scaffold2966.1 : 4236 ... 12848 : + |
| To GenomeBrowser | scaffold2966.1:4236..12848 |
| Genes list of scaffold | scaffold2966.1 |
| Synonym | pfu_aug2.0_281.1_03937 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2966.1_30302.t1 | 9 | 1 | zf-H2C2_2 | 332 | 350 | 5.5e-31 | 105.3 | 0.0024 | 3.2 | 8.2 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 1 | zf-C2H2 | 344 | 366 | 4.0e-26 | 89.7 | 0.57 | 770.0 | 0.7 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 1 | zf-C2H2_4 | 344 | 366 | 1.3e-19 | 68.9 | 0.02 | 27.0 | 5.4 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 2 | zf-H2C2_2 | 359 | 384 | 5.5e-31 | 105.3 | 5.8e-05 | 0.079 | 13.2 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 1 | zf-C2H2_6 | 372 | 391 | 2.8e-08 | 33.3 | 0.00012 | 0.17 | 11.8 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 2 | zf-C2H2 | 373 | 395 | 4.0e-26 | 89.7 | 2.1e-07 | 0.00028 | 21.0 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 2 | zf-C2H2_4 | 373 | 395 | 1.3e-19 | 68.9 | 6.5e-06 | 0.0087 | 16.3 |
| pfu_aug1.0_2966.1_30302.t1 | 8 | 1 | zf-C2H2_jaz | 373 | 392 | 1.1e-14 | 54.0 | 0.0007 | 0.95 | 9.6 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 1 | zf-met | 373 | 392 | 6.0e-07 | 29.4 | 4.6e-05 | 0.062 | 13.5 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 3 | zf-H2C2_2 | 388 | 412 | 5.5e-31 | 105.3 | 3.2e-07 | 0.00044 | 20.4 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 3 | zf-C2H2 | 401 | 423 | 4.0e-26 | 89.7 | 1.4e-06 | 0.0019 | 18.4 |
| pfu_aug1.0_2966.1_30302.t1 | 8 | 2 | zf-C2H2_jaz | 401 | 426 | 1.1e-14 | 54.0 | 0.00062 | 0.83 | 9.8 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 2 | zf-met | 401 | 422 | 6.0e-07 | 29.4 | 0.063 | 84.0 | 3.5 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 3 | zf-C2H2_4 | 402 | 423 | 1.3e-19 | 68.9 | 0.00012 | 0.17 | 12.3 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 2 | zf-C2H2_6 | 403 | 419 | 2.8e-08 | 33.3 | 0.0065 | 8.8 | 6.3 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 4 | zf-H2C2_2 | 415 | 435 | 5.5e-31 | 105.3 | 1.1e-06 | 0.0014 | 18.7 |
| pfu_aug1.0_2966.1_30302.t1 | 8 | 3 | zf-C2H2_jaz | 428 | 451 | 1.1e-14 | 54.0 | 0.0008 | 1.1 | 9.5 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 4 | zf-C2H2 | 429 | 451 | 4.0e-26 | 89.7 | 1.4e-05 | 0.019 | 15.2 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 4 | zf-C2H2_4 | 429 | 451 | 1.3e-19 | 68.9 | 5.5e-06 | 0.0074 | 16.5 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 3 | zf-C2H2_6 | 429 | 451 | 2.8e-08 | 33.3 | 0.11 | 150.0 | 2.4 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 3 | zf-met | 431 | 449 | 6.0e-07 | 29.4 | 0.013 | 17.0 | 5.7 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 5 | zf-H2C2_2 | 443 | 468 | 5.5e-31 | 105.3 | 1.0e-10 | 1.4e-07 | 31.4 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 5 | zf-C2H2 | 457 | 479 | 4.0e-26 | 89.7 | 7.7e-08 | 0.0001 | 22.3 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 5 | zf-C2H2_4 | 457 | 479 | 1.3e-19 | 68.9 | 2.9e-07 | 0.0004 | 20.5 |
| pfu_aug1.0_2966.1_30302.t1 | 8 | 4 | zf-C2H2_jaz | 457 | 479 | 1.1e-14 | 54.0 | 4.7e-06 | 0.0064 | 16.6 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 4 | zf-C2H2_6 | 457 | 480 | 2.8e-08 | 33.3 | 1.3e-06 | 0.0017 | 18.1 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 4 | zf-met | 457 | 479 | 6.0e-07 | 29.4 | 1.2e-05 | 0.016 | 15.3 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 6 | zf-H2C2_2 | 473 | 495 | 5.5e-31 | 105.3 | 3.8e-05 | 0.051 | 13.8 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 6 | zf-C2H2 | 485 | 508 | 4.0e-26 | 89.7 | 2.9e-06 | 0.004 | 17.4 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 6 | zf-C2H2_4 | 485 | 508 | 1.3e-19 | 68.9 | 0.00084 | 1.1 | 9.7 |
| pfu_aug1.0_2966.1_30302.t1 | 8 | 5 | zf-C2H2_jaz | 485 | 505 | 1.1e-14 | 54.0 | 0.5 | 670.0 | 0.6 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 5 | zf-C2H2_6 | 485 | 504 | 2.8e-08 | 33.3 | 0.0051 | 6.8 | 6.7 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 7 | zf-H2C2_2 | 499 | 525 | 5.5e-31 | 105.3 | 0.00045 | 0.6 | 10.5 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 7 | zf-C2H2 | 514 | 536 | 4.0e-26 | 89.7 | 1.3e-08 | 1.8e-05 | 24.7 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 7 | zf-C2H2_4 | 514 | 536 | 1.3e-19 | 68.9 | 8.4e-06 | 0.011 | 15.9 |
| pfu_aug1.0_2966.1_30302.t1 | 8 | 6 | zf-C2H2_jaz | 514 | 532 | 1.1e-14 | 54.0 | 0.0001 | 0.14 | 12.3 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 6 | zf-C2H2_6 | 514 | 529 | 2.8e-08 | 33.3 | 0.16 | 210.0 | 1.9 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 5 | zf-met | 514 | 534 | 6.0e-07 | 29.4 | 0.00024 | 0.33 | 11.2 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 8 | zf-H2C2_2 | 529 | 553 | 5.5e-31 | 105.3 | 3.1e-08 | 4.2e-05 | 23.6 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 7 | zf-C2H2_6 | 541 | 555 | 2.8e-08 | 33.3 | 9.5e-05 | 0.13 | 12.2 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 8 | zf-C2H2 | 542 | 565 | 4.0e-26 | 89.7 | 0.00033 | 0.44 | 10.9 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 8 | zf-C2H2_4 | 542 | 565 | 1.3e-19 | 68.9 | 0.00099 | 1.3 | 9.4 |
| pfu_aug1.0_2966.1_30302.t1 | 8 | 7 | zf-C2H2_jaz | 542 | 562 | 1.1e-14 | 54.0 | 0.00019 | 0.26 | 11.4 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 6 | zf-met | 542 | 562 | 6.0e-07 | 29.4 | 0.001 | 1.4 | 9.2 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 9 | zf-H2C2_2 | 559 | 577 | 5.5e-31 | 105.3 | 0.25 | 340.0 | 1.8 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 9 | zf-C2H2 | 571 | 591 | 4.0e-26 | 89.7 | 0.33 | 450.0 | 1.5 |
| pfu_aug1.0_2966.1_30302.t1 | 9 | 9 | zf-C2H2_4 | 571 | 592 | 1.3e-19 | 68.9 | 0.054 | 73.0 | 4.0 |
| pfu_aug1.0_2966.1_30302.t1 | 8 | 8 | zf-C2H2_jaz | 571 | 591 | 1.1e-14 | 54.0 | 0.0017 | 2.3 | 8.4 |
| pfu_aug1.0_2966.1_30302.t1 | 7 | 7 | zf-met | 571 | 591 | 6.0e-07 | 29.4 | 0.044 | 59.0 | 4.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2966.1_30302.t1 | gi|326666879|ref|XP_003198405.1| | 3.9937e-43 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_2966.1_30302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2966.1_30302.t1 atgcatatgcttgaagaaatggtcaaatgtaagtcagaatcggaattcagtcagaatgtaagtcagaattcttccttaga agaagtcaataggagtgtggaattggataacatagatactgaatataacagttctagtattaattgtgctgttacaagcc taaatcatgtagatggtaactttaaaaatgaaagttcacatagcgatgaagtaaagaaagaggtaaccgatgaactttca gaggaagtgacacatgtgaaaacagaatatggattcaagtatgctgtaaaagttcacgattttagaactgtgtctaaact tcaaaccaacaagtgtgtctcaacaattaataagataaaagctgaggaaaaatctctcaaggtcgaagaacacatttcag atacaataacatgggaagatgaagaaaataccatctcaagtagagagtgtattcttgatacagtatgttatgaattagat aatcaacaaccaggagtcagtgaggtagaccaagaaccagcgagcaaagatttgtccagtgcaaactttccttttgtgga agtaaaaactgaagttagttcagatacggaagacacaaagttcatggtccaagatgatgacagtgatagtgaggcaagca tggaagccgatagaaatctcagtctttccacagtggaggagttatcagcaaatattgcagatcaggattttgaggaggtt acagatgctgattgtattgcaaacctggcattaactagcatcaaacaggaagttgatgaagaggagatttcagatgtcat caaaactgaagcagaagaagaggaggagatgatttcatgtgtcatcaagactgaagaagaagaagaatctgatgaagaca gtgcccaagttaaaagaagaggaagaaagaagaaaatacccacagacattgaaaatgacggtaaacctacagtttacgag tttgatttagaatatattgttaagcatggttttaatgaatatataagagtatttaaaggccggaaaccatttcagtgctc tatgtgtagtttccatgaaacaagcaggtacagactttggcatcattataaaaggcatttaggaaaagaaccagtttatc gctgtcatgtttgccagaaggtcttcaataccagaccaggccttagaattcacatggaaatacataatgatataaaaccc ttcatgtgcagtgattgtggaaaggctttccatcatcgtggagctctgttacggcatgtggaaacacataagaaaaccaa acaatttccatgtgatatatgcggtgccatcttgagaagacgagattcacttaatgaacacctaaagactcacagcaatg tcaaacctttcagatgtgatcactgcaacaagagattctctcgcaaaagtttattgtggggtcacatgcaatcccacagt gacctaaaaccatatagttgcactgaatgttcaaatgattttaaggccttaacctctcttaaaagacatatggccactgc ccattttgacacaaaatcatttatttgccatatttgtaagaaaccattcaagagatcagatcaacttaaggaacatgcta gaacgcatacggatgcaactccatacaaatgtaaattttgcgacaagagtttccgtcatattaaaactcgaaataatcat caaaataagtttcacctgaaatactcttcatttcaatgtcaacactgctccatctacgtctcttcaaacaggattatgaa aaagcactataaacgatataaattaccaaaggaagtaaaatagattgtcaactttgaccttcgtttgacaactttagcat caggcatgccttttgattaa |
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Protein
| Protein ID | pfu_aug1.0_2966.1_30302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2966.1_30302.t1 MHMLEEMVKCKSESEFSQNVSQNSSLEEVNRSVELDNIDTEYNSSSINCAVTSLNHVDGNFKNESSHSDEVKKEVTDELS EEVTHVKTEYGFKYAVKVHDFRTVSKLQTNKCVSTINKIKAEEKSLKVEEHISDTITWEDEENTISSRECILDTVCYELD NQQPGVSEVDQEPASKDLSSANFPFVEVKTEVSSDTEDTKFMVQDDDSDSEASMEADRNLSLSTVEELSANIADQDFEEV TDADCIANLALTSIKQEVDEEEISDVIKTEAEEEEEMISCVIKTEEEEESDEDSAQVKRRGRKKKIPTDIENDGKPTVYE FDLEYIVKHGFNEYIRVFKGRKPFQCSMCSFHETSRYRLWHHYKRHLGKEPVYRCHVCQKVFNTRPGLRIHMEIHNDIKP FMCSDCGKAFHHRGALLRHVETHKKTKQFPCDICGAILRRRDSLNEHLKTHSNVKPFRCDHCNKRFSRKSLLWGHMQSHS DLKPYSCTECSNDFKALTSLKRHMATAHFDTKSFICHICKKPFKRSDQLKEHARTHTDATPYKCKFCDKSFRHIKTRNNH QNKFHLKYSSFQCQHCSIYVSSNRIMKKHYKRYKLPKEVKXIVNFDLRLTTLASGMPFD |
|