Gene
| Gene Model ID | pfu_aug1.0_2972.1_15998 |
|---|---|
| Locus | scaffold2972.1 : 18596 ... 39138 : + |
| To GenomeBrowser | scaffold2972.1:18596..39138 |
| Genes list of scaffold | scaffold2972.1 |
| Synonym | pfu_aug2.0_234.1_13840 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2972.1_15998.t1 | 2 | 1 | zf-B_box | 16 | 58 | 4.5e-16 | 58.4 | 8.5e-10 | 3.2e-06 | 26.9 |
| pfu_aug1.0_2972.1_15998.t1 | 2 | 2 | zf-B_box | 74 | 112 | 4.5e-16 | 58.4 | 5.7e-13 | 2.1e-09 | 37.1 |
Transcript
| Transcript ID | pfu_aug1.0_2972.1_15998.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2972.1_15998.t1 atgagtgacaaaggtgccacgtcgattcccccacagactttcgtggagtgtgacctatgtaaagggaacgtcaacatatc atggttttgtaaaaactgtccgacatcactttgtgacgcatgcgctactgcccacaagacaactcaacaatacaaatccc acaccgttgtaccacggacatacaccgtccttcgattatacggaccggcaaaattagcagaacaatgccacatccatcca gaaaaagaaatttcatcctattgcaacgattgcgatatcccatgctgtgtaacgtgtatggtgaacgatcacaaacgtca tgacttctccactatagaagataaatacctggatgccgagaaaagccttaacgagtactatagaaagcttgataccgacg tcagaccaacgcttgaaaagatggaggaacaagccaggactcatgttcaggaagatagcagccatgctgagaaagtgata aatgagatcaacgatttccgtaaagatgttgttcataattttaatagagcatgtgatgatctcattgttgaggtaaaaca gatgccattcaaaagcaccgaagttttgaaagaaattgaaaactcaatgaaaaaccttgaagcaataaaaaacgaaactg aagaaaaaattgcaaggggggatttagaaatcattacataccaacccccaaaattcgaaacaatcgtccctacatttgat aaaccaacactagttgtaccaattttcaaacctgctagcaaggttttagatgccataaaagaatcagtggggattattga aataaaagagattaatgaaaagcaaattgaaagtaacaaaagcataatttgtttagatattcaaaagatcagatcattta aatgtgagatagggggcacatccatgaccacgtcaggtaacaatatggcctgggttatgcatcataatagtcctaccatg tatctgtataacgatgaggaactgaaacgtcaagtattccatgagaaacattttgctaatagtgctaggactgatttggc taaagaacgcgtacccctgggaccattttag |
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Protein
| Protein ID | pfu_aug1.0_2972.1_15998.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2972.1_15998.t1 MSDKGATSIPPQTFVECDLCKGNVNISWFCKNCPTSLCDACATAHKTTQQYKSHTVVPRTYTVLRLYGPAKLAEQCHIHP EKEISSYCNDCDIPCCVTCMVNDHKRHDFSTIEDKYLDAEKSLNEYYRKLDTDVRPTLEKMEEQARTHVQEDSSHAEKVI NEINDFRKDVVHNFNRACDDLIVEVKQMPFKSTEVLKEIENSMKNLEAIKNETEEKIARGDLEIITYQPPKFETIVPTFD KPTLVVPIFKPASKVLDAIKESVGIIEIKEINEKQIESNKSIICLDIQKIRSFKCEIGGTSMTTSGNNMAWVMHHNSPTM YLYNDEELKRQVFHEKHFANSARTDLAKERVPLGPF |
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