Gene
| Gene Model ID | pfu_aug1.0_2973.1_59082 |
|---|---|
| Locus | scaffold2973.1 : 51246 ... 60251 : + |
| To GenomeBrowser | scaffold2973.1:51246..60251 |
| Genes list of scaffold | scaffold2973.1 |
| Synonym | NA |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | hex |
| Description | High BLAST hits with various metazoans hex genes. |
| mRNA evidence |
| Study field | other developmental genes |
|---|---|
| Gene name | hex |
| Description | The best hit to EU196052.1 Patiria miniata hematopoietically expressed homeobox protein (Hex) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2973.1_59082.t1 | 1 | 1 | Homeobox | 13 | 65 | 1.2e-21 | 76.0 | 7.5e-25 | 1.9e-21 | 75.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2973.1_59082.t1 | gi|45382607|ref|NP_990583.1| | hematopoietically-expressed homeobox protein HHEX [Gallus gallus] | 6.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_2973.1_59082.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2973.1_59082.t1 atgcagagaccacttcataaaagaaaaggtggacaagtacgattctcaaatgaccagactgtggaactggagaagaaatt cgattcccagaagtacttatctcctccagaaagaaaacgacttgcaaaattattacaactaacagaaagacaggttaaaa cttggtttcaaaatcgtagagcaaaatggaggcgtttgaaacaggaatcacctacatgtgaaaaacaagaagaggcacaa ggtcaaggtgatgatgacaaaatggacgccaaagaactggaatataaaaatcagtgtacgtctgatgaagatgactttga tgtagatgagtcggacgatgaaatagatgttgttaaagatgaaaatgaaaaagataacaacagataa |
|
Protein
| Protein ID | pfu_aug1.0_2973.1_59082.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2973.1_59082.t1 MQRPLHKRKGGQVRFSNDQTVELEKKFDSQKYLSPPERKRLAKLLQLTERQVKTWFQNRRAKWRRLKQESPTCEKQEEAQ GQGDDDKMDAKELEYKNQCTSDEDDFDVDESDDEIDVVKDENEKDNNR |
|