Gene
| Gene Model ID | pfu_aug1.0_2974.1_30307 |
|---|---|
| Locus | scaffold2974.1 : 1 ... 37027 : + |
| To GenomeBrowser | scaffold2974.1:1..37027 |
| Genes list of scaffold | scaffold2974.1 |
| Synonym | pfu_aug2.0_51.1_03516 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_2974.1_30307.t1 | 2 | 1 | WD40 | 76 | 107 | 7.3e-19 | 66.8 | 1.1e-10 | 7.9e-07 | 28.7 |
| pfu_aug1.0_2974.1_30307.t1 | 2 | 2 | WD40 | 114 | 149 | 7.3e-19 | 66.8 | 3.1e-13 | 2.3e-09 | 36.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_2974.1_30307.t1 | gi|341892437|gb|EGT48372.1| | CBN-LIN-23 protein [Caenorhabditis brenneri] | 4.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_2974.1_30307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2974.1_30307.t1 ggttgatagagggaattgagaatatggagcagttggtattacaggcaaacacacatcacatgggtatcgactggaaactg gcgtaccaggaactcaaacgtatcaccatacaaatgaaatatgaggaagaaaagaaagtgcgggcagcctttgcagaagc tgagaggttgaggaagaagaaagaggcagaggaagtacgggtctggtacagaatgtctttcttgccatgtaaggtcatca gaggtcatcggggcggagtaaactgtctggcttacgatgggactttcctggtatcaggatctagtgatatgacactcaga ttggtacatttaaagacagaggagtgcctctatgtgttcaagaacggccaggaccaagtgctgtctgtagtggtgtctaa tgatcgaatcgtaacgtgcagcgacgacggcaccgtccggatttgggaccttttcgacagtagtaaagttttgaaacact ga |
|
Protein
| Protein ID | pfu_aug1.0_2974.1_30307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_2974.1_30307.t1 LIEGIENMEQLVLQANTHHMGIDWKLAYQELKRITIQMKYEEEKKVRAAFAEAERLRKKKEAEEVRVWYRMSFLPCKVIR GHRGGVNCLAYDGTFLVSGSSDMTLRLVHLKTEECLYVFKNGQDQVLSVVVSNDRIVTCSDDGTVRIWDLFDSSKVLKH |
|